RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 GOLGA7BQ2TAP0 167 aa16.45■□□□□ 0.22
SNCA-205ENST00000394991 HNRNPA1L2Q32P51 320 aaKnown RBP16.45■□□□□ 0.22
SNCA-205ENST00000394991 FAM133BQ5BKY9 247 aaKnown RBP16.45■□□□□ 0.22
SNCA-205ENST00000394991 PIK3R6Q5UE93 754 aa16.45■□□□□ 0.22
SNCA-205ENST00000394991 BSPRYQ5W0U4 402 aa16.45■□□□□ 0.22
SNCA-205ENST00000394991 ERICH1Q86X53 443 aa16.45■□□□□ 0.22
SNCA-205ENST00000394991 RNF139Q8WU17 664 aa16.45■□□□□ 0.22
SNCA-205ENST00000394991 FGF11Q92914 225 aa16.45■□□□□ 0.22
SNCA-205ENST00000394991 TTC17Q96AE7 1141 aa16.45■□□□□ 0.22
SNCA-205ENST00000394991 SKA1Q96BD8 255 aa16.45■□□□□ 0.22
SNCA-205ENST00000394991 MYEOVQ96EZ4 313 aa16.45■□□□□ 0.22
SNCA-205ENST00000394991 INTS4Q96HW7 963 aaKnown RBP16.45■□□□□ 0.22
SNCA-205ENST00000394991 DNAI2Q9GZS0 605 aa16.45■□□□□ 0.22
SNCA-205ENST00000394991 ADAMTS1Q9UHI8 967 aa16.45■□□□□ 0.22
SNCA-205ENST00000394991 PCDHA7Q9UN72 937 aa16.45■□□□□ 0.22
SNCA-205ENST00000394991 LRRC72A6NJI9 287 aa16.44■□□□□ 0.22
SNCA-205ENST00000394991 XPO1O14980 1071 aaKnown RBP16.44■□□□□ 0.22
SNCA-205ENST00000394991 CALUO43852 315 aaPredicted RBP16.44■□□□□ 0.22
SNCA-205ENST00000394991 RNASEH2AO75792 299 aaKnown RBP16.44■□□□□ 0.22
SNCA-205ENST00000394991 IGLV3-27P01718 113 aa16.44■□□□□ 0.22
SNCA-205ENST00000394991 SLFN14P0C7P3 912 aa16.44■□□□□ 0.22
SNCA-205ENST00000394991 CSKP41240 450 aa16.44■□□□□ 0.22
SNCA-205ENST00000394991 CCR5P51681 352 aa16.44■□□□□ 0.22
SNCA-205ENST00000394991 MPP7Q5T2T1 576 aa16.44■□□□□ 0.22
SNCA-205ENST00000394991 C9orf64Q5T6V5 341 aa16.44■□□□□ 0.22
SNCA-205ENST00000394991 INTS8Q75QN2 995 aaKnown RBP16.44■□□□□ 0.22
SNCA-205ENST00000394991 SPATS2Q86XZ4 545 aaKnown RBP16.44■□□□□ 0.22
SNCA-205ENST00000394991 MMAAQ8IVH4 418 aaKnown RBP16.44■□□□□ 0.22
SNCA-205ENST00000394991 SPACA3Q8IXA5 215 aa16.44■□□□□ 0.22
SNCA-205ENST00000394991 AADATQ8N5Z0 425 aa16.44■□□□□ 0.22
SNCA-205ENST00000394991 RFFLQ8WZ73 363 aa16.44■□□□□ 0.22
SNCA-205ENST00000394991 PAGE5Q96GU1 130 aa16.44■□□□□ 0.22
SNCA-205ENST00000394991 PRICKLE1Q96MT3 831 aaPredicted RBP16.44■□□□□ 0.22
SNCA-205ENST00000394991 TMEM8AQ9HCN3 771 aa16.44■□□□□ 0.22
SNCA-205ENST00000394991 FAM13BQ9NYF5 915 aa16.44■□□□□ 0.22
SNCA-205ENST00000394991 FZD4Q9ULV1 537 aa16.44■□□□□ 0.22
SNCA-205ENST00000394991 HECTD1Q9ULT8 2610 aa16.44■□□□□ 0.22
SNCA-205ENST00000394991 CAPN9O14815 690 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 GLDCP23378 1020 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 NR2F2P24468 414 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 SLC8A1P32418 973 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 RXRGP48443 463 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 ARRB1P49407 418 aaPredicted RBP16.43■□□□□ 0.22
SNCA-205ENST00000394991 ADPRHP54922 357 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 PPP2CBP62714 309 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 PPP2CAP67775 309 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 CXADRP78310 365 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 INSM1Q01101 510 aaPredicted RBP16.43■□□□□ 0.22
SNCA-205ENST00000394991 ILKQ13418 452 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 TBC1D25Q3MII6 688 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 NADSYN1Q6IA69 706 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 MSANTD2Q6P1R3 559 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 MFN1Q8IWA4 741 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 FAM186BQ8IYM0 893 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 CEP57L1Q8IYX8 460 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 CCDC150Q8NCX0 1101 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 SERAC1Q96JX3 654 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 FAM129BQ96TA1 746 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 OMDQ99983 421 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 LRRC4Q9HBW1 653 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 STIM2Q9P246 746 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 TSPAN16Q9UKR8 245 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 CLCA2Q9UQC9 943 aa16.43■□□□□ 0.22
SNCA-205ENST00000394991 TTC34A8MYJ7 566 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 J3QKU1 62 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 TLR4O00206 839 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 RNASEH1O60930 286 aaKnown RBP16.42■□□□□ 0.22
SNCA-205ENST00000394991 CKMT2P17540 419 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 ACTN2P35609 894 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 CTSOP43234 321 aaPredicted RBP16.42■□□□□ 0.22
SNCA-205ENST00000394991 PSMD8P48556 350 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 SLC8A3P57103 927 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 DAOAP59103 153 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 ST8SIA6P61647 398 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 ARID5BQ14865 1188 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 NFIL3Q16649 462 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 PROX2Q3B8N5 592 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 FOXD4L6Q3SYB3 417 aaPredicted RBP16.42■□□□□ 0.22
SNCA-205ENST00000394991 FOXD4L5Q5VV16 416 aaPredicted RBP16.42■□□□□ 0.22
SNCA-205ENST00000394991 FOXD4L3Q6VB84 417 aaPredicted RBP16.42■□□□□ 0.22
SNCA-205ENST00000394991 MMS22LQ6ZRQ5 1243 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 CACTIN-AS1Q8N1I8 211 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 TTC39CQ8N584 583 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 DCBLD1Q8N8Z6 715 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 FIBINQ8TAL6 211 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 FOXD4L4Q8WXT5 416 aaPredicted RBP16.42■□□□□ 0.22
SNCA-205ENST00000394991 FAXDC2Q96IV6 333 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 IRX2Q9BZI1 471 aaPredicted RBP16.42■□□□□ 0.22
SNCA-205ENST00000394991 ERVMER34-1Q9H9K5 563 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 ABCC13Q9NSE7 274 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 ERVW-1Q9UQF0 538 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 ITIH6Q6UXX5 1313 aa16.42■□□□□ 0.22
SNCA-205ENST00000394991 COL27A1Q8IZC6 1860 aaPredicted RBP16.42■□□□□ 0.22
SNCA-205ENST00000394991 IRAK2O43187 625 aa16.41■□□□□ 0.22
SNCA-205ENST00000394991 LATO43561 262 aa16.41■□□□□ 0.22
SNCA-205ENST00000394991 ACSL4O60488 711 aa16.41■□□□□ 0.22
SNCA-205ENST00000394991 GABBR2O75899 941 aa16.41■□□□□ 0.22
SNCA-205ENST00000394991 ASLP04424 464 aa16.41■□□□□ 0.22
SNCA-205ENST00000394991 KRT13P13646 458 aa16.41■□□□□ 0.22
SNCA-205ENST00000394991 ACP1P24666 158 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms