RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 VAC14Q08AM6 782 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 ATG16L2Q8NAA4 619 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 CENPTQ96BT3 561 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 KAZALD1Q96I82 304 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 CATSPER2Q96P56 530 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 PANX3Q96QZ0 392 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 OSBPL6Q9BZF3 934 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 PTPRHQ9HD43 1115 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 COMMD8Q9NX08 183 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 HPSEQ9Y251 543 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 CARNS1A5YM72 827 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 UBDO15205 165 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 ADCY6O43306 1168 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 EIF2S1P05198 315 aaKnown RBP10.6□□□□□ -0.71
COL4A6-203ENST00000394872 SKIV2L2P42285 1042 aaKnown RBP10.6□□□□□ -0.71
COL4A6-203ENST00000394872 THOP1P52888 689 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 MRPS6P82932 125 aaKnown RBP10.6□□□□□ -0.71
COL4A6-203ENST00000394872 KCNMA1Q12791 1236 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 CRYMQ14894 314 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 TRAPPC5Q8IUR0 188 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 VPS33AQ96AX1 596 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 ULBP1Q9BZM6 244 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 MARCH2Q9P0N8 246 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 SMIM10L2AP0DMW4 78 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 SMIM10L2BP0DMW5 78 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 SERPINA4P29622 427 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 SERPINB1P30740 379 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 ATP5C1P36542 298 aaKnown RBP10.6□□□□□ -0.71
COL4A6-203ENST00000394872 FEN1P39748 380 aaKnown RBP10.6□□□□□ -0.71
COL4A6-203ENST00000394872 CREMQ03060 361 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 GRIK3Q13003 919 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 TOMM20Q15388 145 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 ZNF470Q6ECI4 717 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 ZFPM1Q8IX07 1006 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 CPNE1Q99829 537 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 IDI2Q9BXS1 227 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 EVA1BQ9NVM1 165 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 TAGLN3Q9UI15 199 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 FRMPD4Q14CM0 1322 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 SEC22BO75396 215 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 NOS3P29474 1203 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 SLC1A6P48664 564 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 CCDC153Q494R4 210 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 TMEM119Q4V9L6 283 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 CATSPERGQ6ZRH7 1159 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 FNDC5Q8NAU1 212 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 GRIN3AQ8TCU5 1115 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 TRPC4APQ8TEL6 797 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 APBA2Q99767 749 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 HACD1B0YJ81 288 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 FAM220BPB1ANY3 271 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 SERPINB3P29508 390 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 SLC12A3P55017 1021 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 CCL23P55773 120 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 SP3Q02447 781 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 N4BP2L1Q5TBK1 243 aaPredicted RBP10.6□□□□□ -0.71
COL4A6-203ENST00000394872 CES3Q6UWW8 571 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 MILR1Q7Z6M3 343 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 FIG4Q92562 907 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 CORO1BQ9BR76 489 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 FHDC1Q9C0D6 1143 aaPredicted RBP10.6□□□□□ -0.71
COL4A6-203ENST00000394872 MID1IP1Q9NPA3 183 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 PCDHA3Q9Y5H8 950 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 ZBTB14O43829 449 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 PRLRP16471 622 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 INSCQ1MX18 579 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 GPR141Q7Z602 305 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 COMMD2Q86X83 199 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 ZNF557Q8N988 423 aaPredicted RBP10.6□□□□□ -0.71
COL4A6-203ENST00000394872 SPATA20Q8TB22 786 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 GLMNQ92990 594 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 ZFYVE1Q9HBF4 777 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 PCDHGA4Q9Y5G9 962 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 SLC9A3R1O14745 358 aaPredicted RBP10.59□□□□□ -0.71
COL4A6-203ENST00000394872 PGK1P00558 417 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 PSMC3P17980 439 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 PTPN1P18031 435 aaKnown RBP10.59□□□□□ -0.71
COL4A6-203ENST00000394872 CLK2P49760 499 aaKnown RBP10.59□□□□□ -0.71
COL4A6-203ENST00000394872 RASA2Q15283 850 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 TRIM71Q2Q1W2 868 aaKnown RBP10.59□□□□□ -0.71
COL4A6-203ENST00000394872 KIAA1324Q6UXG2 1013 aaKnown RBP10.59□□□□□ -0.71
COL4A6-203ENST00000394872 OR56A4Q8NGH8 313 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 APBB2Q92870 758 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 MTFMTQ96DP5 389 aaKnown RBP10.59□□□□□ -0.71
COL4A6-203ENST00000394872 PHACTR1Q9C0D0 580 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 POLR1EQ9GZS1 481 aaKnown RBP10.59□□□□□ -0.71
COL4A6-203ENST00000394872 E5RJQ4 531 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 BTN3A1O00481 513 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 VAPBO95292 243 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 UBA1P22314 1058 aaKnown RBP10.59□□□□□ -0.71
COL4A6-203ENST00000394872 MAGEC3Q8TD91 643 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 SEMA4DQ92854 862 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 COPS5Q92905 334 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 TPD52L3Q96J77 140 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 ASAH2Q9NR71 780 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 ARHGAP20Q9P2F6 1191 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 DNMT3LQ9UJW3 386 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 ANKRD63C9JTQ0 380 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 ELK3P41970 407 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 GCNT1Q02742 428 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms