RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 FBXO47Q5MNV8 452 aa16.53■□□□□ 0.24
PCDH1-203ENST00000394536 PCDH20Q8N6Y1 951 aaKnown RBP16.53■□□□□ 0.24
PCDH1-203ENST00000394536 TUBGCP5Q96RT8 1024 aa16.53■□□□□ 0.24
PCDH1-203ENST00000394536 XYLT2Q9H1B5 865 aa16.53■□□□□ 0.24
PCDH1-203ENST00000394536 COG4Q9H9E3 785 aa16.53■□□□□ 0.24
PCDH1-203ENST00000394536 SIX4Q9UIU6 781 aa16.53■□□□□ 0.24
PCDH1-203ENST00000394536 TNRC6CQ9HCJ0 1690 aaKnown RBP16.53■□□□□ 0.24
PCDH1-203ENST00000394536 IRF6O14896 467 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 HCRTO43612 131 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 MAGEC1O60732 1142 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 COX4I1P13073 169 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 PMLP29590 882 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 GABRB2P47870 512 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 ESRRGP62508 458 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 CDC16Q13042 620 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 GRM1Q13255 1194 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 VGLL4Q14135 290 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 KCNJ11Q14654 390 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 SLC10A6Q3KNW5 377 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 TMCO4Q5TGY1 634 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 KLC3Q6P597 504 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 CYP2R1Q6VVX0 501 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 TSHZ1Q6ZSZ6 1077 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 ARCQ7LC44 396 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 LCA5Q86VQ0 697 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 SKA1Q96BD8 255 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 MOCOSQ96EN8 888 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 GPR20Q99678 358 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 EPAS1Q99814 870 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 SNX15Q9NRS6 342 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 SOWAHBA6NEL2 793 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 M0QZ92 97 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 CLDN5O00501 218 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 AKAP10O43572 662 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 PIGRP01833 764 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 NELFEP18615 380 aaKnown RBP16.52■□□□□ 0.24
PCDH1-203ENST00000394536 SH3BGRP55822 239 aaPredicted RBP16.52■□□□□ 0.24
PCDH1-203ENST00000394536 MOB2Q70IA6 237 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 CCDC185Q8N715 623 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 MCRS1Q96EZ8 462 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 ZNF560Q96MR9 790 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 ZNF670Q9BS34 389 aa16.52■□□□□ 0.24
PCDH1-203ENST00000394536 VAPBO95292 243 aa16.52■□□□□ 0.23
PCDH1-203ENST00000394536 ACADSBP45954 432 aa16.52■□□□□ 0.23
PCDH1-203ENST00000394536 NR2C2P49116 596 aa16.52■□□□□ 0.23
PCDH1-203ENST00000394536 ZNF132P52740 706 aa16.52■□□□□ 0.23
PCDH1-203ENST00000394536 SLC18A2Q05940 514 aa16.52■□□□□ 0.23
PCDH1-203ENST00000394536 LCLAT1Q6UWP7 414 aa16.52■□□□□ 0.23
PCDH1-203ENST00000394536 SCN4BQ8IWT1 228 aa16.52■□□□□ 0.23
PCDH1-203ENST00000394536 PHF21BQ96EK2 531 aa16.52■□□□□ 0.23
PCDH1-203ENST00000394536 GRIP2Q9C0E4 1043 aa16.52■□□□□ 0.23
PCDH1-203ENST00000394536 EFCAB1Q9HAE3 211 aa16.52■□□□□ 0.23
PCDH1-203ENST00000394536 S100A14Q9HCY8 104 aa16.52■□□□□ 0.23
PCDH1-203ENST00000394536 FETUBQ9UGM5 382 aa16.52■□□□□ 0.23
PCDH1-203ENST00000394536 MFHAS1Q9Y4C4 1052 aa16.52■□□□□ 0.23
PCDH1-203ENST00000394536 ASB14A6NK59 587 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 PLIN3O60664 434 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 CSPG5O95196 566 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 ARIH2O95376 493 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 RABGGTBP53611 331 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 PDK3Q15120 406 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 DGKDQ16760 1214 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 PIGZQ86VD9 579 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 CAND1Q86VP6 1230 aaKnown RBP16.51■□□□□ 0.23
PCDH1-203ENST00000394536 KCNMB4Q86W47 210 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 MFN1Q8IWA4 741 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 ENDOVQ8N8Q3 282 aaKnown RBP16.51■□□□□ 0.23
PCDH1-203ENST00000394536 PDZD8Q8NEN9 1154 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 MPP4Q96JB8 637 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 CCT7Q99832 543 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 GOLGA2P5Q9HBQ8 144 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 PDLIM7Q9NR12 457 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 TSR3Q9UJK0 312 aaKnown RBP16.51■□□□□ 0.23
PCDH1-203ENST00000394536 FGFR3P22607 806 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 TKTL1P51854 596 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 ACTR3P61158 418 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 PDAP1Q13442 181 aaKnown RBP16.51■□□□□ 0.23
PCDH1-203ENST00000394536 LBRQ14739 615 aaKnown RBP16.51■□□□□ 0.23
PCDH1-203ENST00000394536 CERCAMQ5T4B2 595 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 MFSD3Q96ES6 412 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 LENG8Q96PV6 779 aaPredicted RBP16.51■□□□□ 0.23
PCDH1-203ENST00000394536 TMPRSS4Q9NRS4 437 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 RHBDL2Q9NX52 303 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 V9GYQ6 96 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 GMNNO75496 209 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 CYP2C9P11712 490 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 DDIASQ8IXT1 998 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 OR6J1Q8NGC5 347 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 TRPM4Q8TD43 1214 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 JADE3Q92613 823 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 DPEP3Q9H4B8 488 aa16.51■□□□□ 0.23
PCDH1-203ENST00000394536 BIRC5O15392 142 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 RFPL1O75677 317 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 CYP2C8P10632 490 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 ALDH1A3P47895 512 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 PTK2BQ14289 1009 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 TMC7Q7Z402 723 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 DIS3LQ8TF46 1054 aaKnown RBP16.5■□□□□ 0.23
PCDH1-203ENST00000394536 SLC10A4Q96EP9 437 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 PTCD3Q96EY7 689 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms