RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 HMGA1P17096 107 aaKnown RBP11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 GABRG2P18507 467 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 EIF2DP41214 584 aaKnown RBP11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 MATKP42679 507 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 KIR2DL1P43626 348 aaPredicted RBP11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 LHX1P48742 406 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 NAP1L1P55209 391 aaKnown RBP11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 GNG11P61952 73 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 CXADRP78310 365 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 SEMG2Q02383 582 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 SMARCB1Q12824 385 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 CNGA2Q16280 664 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 GAB4Q2WGN9 574 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 ZNF569Q5MCW4 686 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 IL27RAQ6UWB1 636 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 DBX2Q6ZNG2 339 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 METTL23Q86XA0 190 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 ADGRF2Q8IZF7 708 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 PDCL2Q8N4E4 241 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 TMEM35BQ8NCS4 154 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 SPPL2BQ8TCT7 592 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 FOXJ1Q92949 421 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 TRIM11Q96F44 468 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 TNIP3Q96KP6 325 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 PNKPQ96T60 521 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 ZNF518BQ9C0D4 1074 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 ZCWPW1Q9H0M4 648 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 GAREM1Q9H706 876 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 IL21RQ9HBE5 538 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 UXTQ9UBK9 157 aaPredicted RBP11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 DSEQ9UL01 958 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 PCDHGC3Q9UN70 934 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 L1RE1Q9UN81 338 aa11.54□□□□□ -0.56
VTI1BP2-201ENST00000394154 A0A0A6YYK5 440 aaPredicted RBP11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 A0A1B0GTW7 788 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 MACROD2A1Z1Q3 448 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 ZBTB24O43167 697 aaPredicted RBP11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 KAT7O95251 611 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 CYP1A1P04798 512 aaPredicted RBP11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 PDGFRBP09619 1106 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 CSH1P0DML2 217 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 CSH2P0DML3 217 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 ODC1P11926 461 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 TNFRSF4P43489 277 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 NOP2P46087 812 aaKnown RBP11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 NSFP46459 744 aaKnown RBP11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 EMC10Q5UCC4 262 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 NAA35Q5VZE5 725 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 WSCD1Q658N2 575 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 TRMT11Q7Z4G4 463 aaKnown RBP11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 SFTPA1Q8IWL2 248 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 CRYBG2Q8N1P7 616 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 OR10T2Q8NGX3 314 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 KIF18AQ8NI77 898 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 SH3RF2Q8TEC5 729 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 TFAP2BQ92481 460 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 CYFIP2Q96F07 1278 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 CALR3Q96L12 384 aaKnown RBP11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 NOX5Q96PH1 765 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 TWNKQ96RR1 684 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 PACSIN1Q9BY11 444 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 LHX5Q9H2C1 402 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 LINC00597Q9H2U6 94 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 TRPC7Q9HCX4 862 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 TAS2R14Q9NYV8 317 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 TRIM10Q9UDY6 481 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 HMGXB4Q9UGU5 601 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 MAGED2Q9UNF1 606 aaPredicted RBP11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 TFR2Q9UP52 801 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 FNDC3AQ9Y2H6 1198 aaKnown RBP11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 PAXBP1Q9Y5B6 917 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 AK5Q9Y6K8 562 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 DUSP10Q9Y6W6 482 aa11.53□□□□□ -0.56
VTI1BP2-201ENST00000394154 TEX15Q9BXT5 2789 aa11.52□□□□□ -0.56
VTI1BP2-201ENST00000394154 A0A0A0MRY4 1105 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 TADA3O75528 432 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 ABL1P00519 1130 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 MYBL1P10243 752 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 UNGP13051 313 aaPredicted RBP11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 ABCB4P21439 1286 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 CASQ1P31415 396 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 HNF1BP35680 557 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 NOMO3P69849 1222 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 CENPCQ03188 943 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 TLE3Q04726 772 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 ORC1Q13415 861 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 SUZ12Q15022 739 aaKnown RBP11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 PTPRNQ16849 979 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 LCLAT1Q6UWP7 414 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 DHRS13Q6UX07 377 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 SYT10Q6XYQ8 523 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 ACOT1Q86TX2 421 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 PHF13Q86YI8 300 aaPredicted RBP11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 PASD1Q8IV76 773 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 RHOT2Q8IXI1 618 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 MSANTD4Q8NCY6 345 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 TRIM58Q8NG06 486 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 KCNV2Q8TDN2 545 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 KBTBD7Q8WVZ9 684 aa11.52□□□□□ -0.57
VTI1BP2-201ENST00000394154 CPA5Q8WXQ8 436 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms