RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 HIST1H2AHQ96KK5 128 aa16.9■□□□□ 0.3
SNX9-201ENST00000392185 HIST1H2AJQ99878 128 aa16.9■□□□□ 0.3
SNX9-201ENST00000392185 H2AFJQ9BTM1 129 aa16.9■□□□□ 0.3
SNX9-201ENST00000392185 NEUROG2Q9H2A3 272 aa16.9■□□□□ 0.3
SNX9-201ENST00000392185 ACOT9Q9Y305 439 aa16.9■□□□□ 0.3
SNX9-201ENST00000392185 MYH10P35580 1976 aa16.9■□□□□ 0.3
SNX9-201ENST00000392185 GSTA4O15217 222 aa16.9■□□□□ 0.3
SNX9-201ENST00000392185 MT-CO1P00395 513 aa16.9■□□□□ 0.3
SNX9-201ENST00000392185 HMOX2P30519 316 aa16.9■□□□□ 0.3
SNX9-201ENST00000392185 ATXN3P54252 364 aaPredicted RBP16.9■□□□□ 0.3
SNX9-201ENST00000392185 PDCD2Q16342 344 aaPredicted RBP16.9■□□□□ 0.3
SNX9-201ENST00000392185 FBXW10Q5XX13 1052 aa16.9■□□□□ 0.3
SNX9-201ENST00000392185 RETSATQ6NUM9 610 aa16.9■□□□□ 0.3
SNX9-201ENST00000392185 CSPG4P5Q96PW8 444 aa16.9■□□□□ 0.3
SNX9-201ENST00000392185 TM6SF2Q9BZW4 377 aa16.9■□□□□ 0.3
SNX9-201ENST00000392185 PCDHB8Q9UN66 801 aa16.9■□□□□ 0.3
SNX9-201ENST00000392185 SP100P23497 879 aaPredicted RBP16.89■□□□□ 0.3
SNX9-201ENST00000392185 CDKN2BP42772 138 aa16.89■□□□□ 0.3
SNX9-201ENST00000392185 EFTUD2Q15029 972 aaKnown RBP eCLIP16.89■□□□□ 0.31e-8■■■■□ 20.3
SNX9-201ENST00000392185 SZRD1Q7Z422 152 aa16.89■□□□□ 0.3
SNX9-201ENST00000392185 KCNMB4Q86W47 210 aa16.89■□□□□ 0.3
SNX9-201ENST00000392185 DRC3Q9H069 523 aa16.89■□□□□ 0.3
SNX9-201ENST00000392185 SIX4Q9UIU6 781 aa16.89■□□□□ 0.3
SNX9-201ENST00000392185 CACNA1SQ13698 1873 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 MARF1Q9Y4F3 1742 aaKnown RBP16.89■□□□□ 0.29
SNX9-201ENST00000392185 HACD1B0YJ81 288 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 GNGT2O14610 69 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 DGKIO75912 1065 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 TOMM70O94826 608 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 ENO3P13929 434 aaPredicted RBP16.89■□□□□ 0.29
SNX9-201ENST00000392185 TCF4P15884 667 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 PGM1P36871 562 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 TXNRD3NBQ6F5E7 133 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 SLC26A9Q7LBE3 791 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 CFAP52Q8N1V2 620 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 P2RY11Q96G91 374 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 CORO1BQ9BR76 489 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 GPAMQ9HCL2 828 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 HEY2Q9UBP5 337 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 MYO7AQ13402 2215 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 DAB1O75553 588 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 SOAT2O75908 522 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 ADRA1DP25100 572 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 CYP2C18P33260 490 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 GP5P40197 560 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 SMAD3P84022 425 aaKnown RBP16.89■□□□□ 0.29
SNX9-201ENST00000392185 PARP6Q2NL67 630 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 C16orf46Q6P387 395 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 MON1AQ86VX9 555 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 BORCS6Q96GS4 357 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 IRAK4Q9NWZ3 460 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 SNX10Q9Y5X0 201 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 A0A1W2PQH9 124 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 YJEFN3A6XGL0 299 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 E7ENQ6 273 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 MMP13P45452 471 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 AARSP49588 968 aaKnown RBP eCLIP16.89■□□□□ 0.29
SNX9-201ENST00000392185 SLC5A3P53794 718 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 AUHQ13825 339 aaKnown RBP16.89■□□□□ 0.29
SNX9-201ENST00000392185 PPM1LQ5SGD2 360 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 CDCA2Q69YH5 1023 aaPredicted RBP16.89■□□□□ 0.29
SNX9-201ENST00000392185 HERC6Q8IVU3 1022 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 ART4Q93070 314 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 KLHL5Q96PQ7 755 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 PLK2Q9NYY3 685 aa16.89■□□□□ 0.29
SNX9-201ENST00000392185 UNCXA6NJT0 531 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 AIM2O14862 343 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 CCNB1P14635 433 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 ITGB6P18564 788 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 RGS4P49798 205 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 SPDYAQ5MJ70 313 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 STRADAQ7RTN6 431 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 PLD5Q8N7P1 536 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 SNX19Q92543 992 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 RHOBTB2Q9BYZ6 727 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 IGFLR1Q9H665 355 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 TRMT6Q9UJA5 497 aaKnown RBP16.88■□□□□ 0.29
SNX9-201ENST00000392185 NAV1Q8NEY1 1877 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 B2RBV5 119 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 CFAP99D6REC4 459 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 PMM2O15305 246 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 PAGE1O75459 146 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 KCNA4P22459 653 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 INTS6LQ5JSJ4 861 aaKnown RBP16.88■□□□□ 0.29
SNX9-201ENST00000392185 DTX3LQ8TDB6 740 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 PGM2Q96G03 612 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 EFHD1Q9BUP0 239 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 UPF3AQ9H1J1 476 aaKnown RBP16.88■□□□□ 0.29
SNX9-201ENST00000392185 TBC1D13Q9NVG8 400 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 ADAM28Q9UKQ2 775 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 PHGDHO43175 533 aaKnown RBP16.88■□□□□ 0.29
SNX9-201ENST00000392185 TRIM16O95361 564 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 CKBP12277 381 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 SERPINB8P50452 374 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 ITGA9Q13797 1035 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 TAF11Q15544 211 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 C6orf10Q5SRN2 563 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 N4BP2L1Q5TBK1 243 aaPredicted RBP16.88■□□□□ 0.29
SNX9-201ENST00000392185 ZCCHC23Q6ZST2 131 aa16.88■□□□□ 0.29
SNX9-201ENST00000392185 NLRP9Q7RTR0 991 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms