RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 COPEO14579 308 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 KRT37O76014 449 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 TOMM70O94826 608 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 ITGB1P05556 798 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 T-ENOLP0DO92 83 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 CCNB1P14635 433 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 MGAT1P26572 445 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 TARSP26639 723 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 THPOP40225 353 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 GLUD2P49448 558 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 SEMA3BQ13214 749 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 CASC4Q6P4E1 433 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 CES3Q6UWW8 571 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 CD300LGQ6UXG3 332 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 PLPP6Q8IY26 295 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 TMEM86AQ8N2M4 240 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 MYLPFQ96A32 169 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 TMEM237Q96Q45 408 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 XAB2Q9HCS7 855 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 ARHGEF3Q9NR81 526 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 DDIT4Q9NX09 232 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 NLRC5Q86WI3 1866 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 CFAP73A6NFT4 308 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 C2orf71A6NGG8 1288 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 MOXD2PA6NHM9 499 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 FAM155AB1AL88 458 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 USP12O75317 370 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 B3GAT3O94766 335 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 UNC5CO95185 931 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 ATP6V1G2O95670 118 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 LTFP02788 710 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 ASGR1P07306 291 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 FAM163BP0C2L3 166 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 BDNFP23560 247 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 FDFT1P37268 417 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 FLT3LGP49771 235 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 ATN1P54259 1190 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 SNCBQ16143 134 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 NLRP9Q7RTR0 991 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 LRRTM3Q86VH5 581 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 STAMBPL1Q96FJ0 436 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 AGAP3Q96P47 875 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 TSSK1BQ9BXA7 367 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 ZNF395Q9H8N7 513 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 KCNK13Q9HB14 408 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 CNGB3Q9NQW8 809 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 CHST12Q9NRB3 414 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 HAO1Q9UJM8 370 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 FBXW11Q9UKB1 542 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 CDH9Q9ULB4 789 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 GIT1Q9Y2X7 761 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 PLLPQ9Y342 182 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 OPHN1O60890 802 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 ADAMTS4O75173 837 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 CBX6O95503 412 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 F7P08709 466 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 SLC10A3P09131 477 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 PDK1Q15118 436 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 LRRC8BQ6P9F7 803 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 BZW1Q7L1Q6 419 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 PID1Q7Z2X4 250 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 MRPL10Q7Z7H8 261 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 RSPH3Q86UC2 560 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 MTDHQ86UE4 582 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 CHSY1Q86X52 802 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 ARMC2Q8NEN0 867 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 UTP4Q969X6 686 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 PGBD4Q96DM1 585 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 COLEC11Q9BWP8 271 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 PCMTD2Q9NV79 361 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 SYBUQ9NX95 663 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 BAIAP2L1Q9UHR4 511 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 STK38LQ9Y2H1 464 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 INPP5FQ9Y2H2 1132 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 PSAT1Q9Y617 370 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 A0A0G2JND7 137 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 C9IYK1 514 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 C2CD2LO14523 706 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 GPR182O15218 404 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 KPNA6O60684 536 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 FBXO21O94952 628 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 GSTA2P09210 222 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 YY1P25490 414 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 PTPN3P26045 913 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 CCND3P30281 292 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 TPI1P60174 286 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 CACNB2Q08289 660 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 KCNA10Q16322 511 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 TAF1BQ53T94 588 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 ICE2Q659A1 982 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 STEAP4Q687X5 459 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 ZNF449Q6P9G9 518 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 DEPDC4Q8N2C3 294 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 OR10T2Q8NGX3 314 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 SCAMP5Q8TAC9 235 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 NTAN1Q96AB6 310 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 SMARCD1Q96GM5 515 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 PRR11Q96HE9 360 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 SPACA7Q96KW9 195 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms