RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 ITGA3P26006 1051 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 ATP8B4Q8TF62 1192 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 ATL1Q8WXF7 558 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 RIT1Q92963 219 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 CAB39LQ9H9S4 337 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 NEO1Q92859 1461 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 NR2C2P49116 596 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 SUSD4Q5VX71 490 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 KLHL4Q9C0H6 718 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 MYOZ2Q9NPC6 264 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 COL6A6A6NMZ7 2263 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 PTPRTO14522 1441 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 MECP2P51608 486 aaKnown RBP11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 DCTN2Q13561 401 aaKnown RBP11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 SMARCD1Q96GM5 515 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 SYNPO2Q9UMS6 1093 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 CPDO75976 1380 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 PPIDQ08752 370 aaKnown RBP11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 ABRAXAS1Q6UWZ7 409 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 TRAPPC5Q8IUR0 188 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 UBASH3BQ8TF42 649 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 CXorf40BQ96DE9 158 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 FAM120BQ96EK7 910 aaKnown RBP11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 MINPP1Q9UNW1 487 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 SCAF8Q9UPN6 1271 aaKnown RBP11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 ERI2A8K979 691 aaKnown RBP11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 SMIM11AP58511 58 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 PIK3R5Q8WYR1 880 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 STRBPQ96SI9 672 aaKnown RBP11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 ATXN3LQ9H3M9 355 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 DNPEPQ9ULA0 475 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 CHD3Q12873 2000 aaKnown RBP11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 CES2O00748 559 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 OR1E1P30953 314 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 ERFP50548 548 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 PTPN21Q16825 1174 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 SIN3BO75182 1162 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 CYP17A1P05093 508 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 ANKRD13AQ8IZ07 590 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 OR5T3Q8NGG3 340 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 FEZF2Q8TBJ5 459 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 GGA3Q9NZ52 723 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 ARHGEF40Q8TER5 1519 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 CCR1P32246 355 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 BOP1Q14137 746 aaKnown RBP11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 ATCAYQ86WG3 371 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 MCEMP1Q8IX19 187 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 EFCAB1Q9HAE3 211 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 A0A1W2PQ72 361 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 ESYT3A0FGR9 886 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 RGS14O43566 566 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 AKR1B1P15121 316 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 SPATA5L1Q9BVQ7 753 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 RRN3Q9NYV6 651 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 MED12Q93074 2177 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 CCDC154A6NI56 674 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 PRG2P13727 222 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 PROSER3Q2NL68 480 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 RETSATQ6NUM9 610 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 IGFLR1Q9H665 355 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 RBAK-RBAKDNI3L0D1 243 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 CCDC153Q494R4 210 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 NKX2-3Q8TAU0 364 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 RHOBTB2Q9BYZ6 727 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 BAZ2AQ9UIF9 1905 aaKnown RBP11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 PRKAA2P54646 552 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 KYNUQ16719 465 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 KIAA2026Q5HYC2 2103 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 SCUBE1Q8IWY4 988 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 SLC35C2Q9NQQ7 365 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 ABI3Q9P2A4 366 aa11.45□□□□□ -0.58
PTCHD1-201ENST00000379361 MED24O75448 989 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 MYBP10242 640 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 ZNF7P17097 686 aaPredicted RBP11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 Q96MT0 163 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 NT5MQ9NPB1 228 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 TMEM260Q9NX78 707 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 BAATQ14032 418 aaPredicted RBP11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 ALX1Q15699 326 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 HEATR4Q86WZ0 1026 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 SLC12A4Q9UP95 1085 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 CST8O60676 142 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 CCT3P49368 545 aaKnown RBP11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 C1QTNF1Q9BXJ1 281 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 GPAMQ9HCL2 828 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 ACAP2Q15057 778 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 KYQ8NBH2 561 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 PDE2AO00408 941 aaPredicted RBP11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 PSMB9P28065 219 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 FAM182BQ5T319 152 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 LMAN2LQ9H0V9 348 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 C1QTNF3-AMACRE9PGA6 284 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 SERPINF2P08697 491 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 TCF7P36402 384 aaPredicted RBP11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 DGUOKQ16854 277 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 AGBL2Q5U5Z8 902 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 ASAH2Q9NR71 780 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 DOCK11Q5JSL3 2073 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms