RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 CSGALNACT1Q8TDX6 532 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 MYCBPQ99417 103 aaPredicted RBP20.11■□□□□ 0.81
PCDH8-202ENST00000377942 ZNF556Q9HAH1 456 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 ACP6Q9NPH0 428 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 DDX39BQ13838 428 aaKnown RBP20.11■□□□□ 0.81
PCDH8-202ENST00000377942 CNGA3Q16281 694 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 BBS12Q6ZW61 710 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 FAM35AQ86V20 835 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 STK40Q8N2I9 435 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 CAPNS2Q96L46 248 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 ECSITQ9BQ95 431 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 ZYG11BQ9C0D3 744 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 IL22Q9GZX6 179 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 ETNK2Q9NVF9 386 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 LTBP3Q9NS15 1303 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 SOWAHBA6NEL2 793 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 CTNNB1P35222 781 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 OVGP1Q12889 678 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 BMPR2Q13873 1038 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 MYCBPAPQ8TBZ2 947 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 PPP1R13LQ8WUF5 828 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 OXCT2Q9BYC2 517 aaPredicted RBP20.11■□□□□ 0.81
PCDH8-202ENST00000377942 RAD18Q9NS91 495 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 UTP6Q9NYH9 597 aaKnown RBP20.11■□□□□ 0.81
PCDH8-202ENST00000377942 COL20A1Q9P218 1284 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 ZSCAN9O15535 394 aaPredicted RBP20.1■□□□□ 0.81
PCDH8-202ENST00000377942 DDHD2O94830 711 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 OR56A5P0C7T3 313 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 CYP2A7P20853 494 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 TMEM159Q96B96 161 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 PCYOX1Q9UHG3 505 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 DNAJC16Q9Y2G8 782 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 SEPT4O43236 478 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 ATP6V1E1P36543 226 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 SERPINH1P50454 418 aaKnown RBP20.1■□□□□ 0.81
PCDH8-202ENST00000377942 SRLQ86TD4 932 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 EIF2AQ9BY44 585 aaKnown RBP20.1■□□□□ 0.81
PCDH8-202ENST00000377942 NEUROG2Q9H2A3 272 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 HIPK3Q9H422 1215 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 RGS18Q9NS28 235 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 NUDT5Q9UKK9 219 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 SMIM28A0A1B0GU29 152 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 ZSCAN5CA6NGD5 496 aaPredicted RBP20.1■□□□□ 0.81
PCDH8-202ENST00000377942 VAPBO95292 243 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 ATP4AP20648 1035 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 NRDE2Q9H7Z3 1164 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 WDR41Q9HAD4 459 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 CYP4F12Q9HCS2 524 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 CHD2O14647 1828 aaKnown RBP20.1■□□□□ 0.81
PCDH8-202ENST00000377942 CYP1A1P04798 512 aaPredicted RBP20.1■□□□□ 0.81
PCDH8-202ENST00000377942 CYP3A5P20815 502 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 SOAT1P35610 550 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 SH3D19Q5HYK7 790 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 BRMS1LQ5PSV4 323 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 ZNF470Q6ECI4 717 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 MON1AQ86VX9 555 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 PHACTR4Q8IZ21 702 aa20.1■□□□□ 0.81
PCDH8-202ENST00000377942 NCF1BA6NI72 391 aaPredicted RBP20.09■□□□□ 0.81
PCDH8-202ENST00000377942 NCF1CA8MVU1 366 aaPredicted RBP20.09■□□□□ 0.81
PCDH8-202ENST00000377942 NCF1P14598 390 aaPredicted RBP20.09■□□□□ 0.81
PCDH8-202ENST00000377942 TSHRP16473 764 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 OCA2Q04671 838 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 TGM3Q08188 693 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 EME1Q96AY2 570 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 COPS7BQ9H9Q2 264 aaPredicted RBP20.09■□□□□ 0.81
PCDH8-202ENST00000377942 LRRC37A3O60309 1634 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 RAD51BO15315 384 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 KRT6AP02538 564 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 KRT6BP04259 564 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 ELNP15502 786 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 KRT6CP48668 564 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 PRKAA1Q13131 559 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 OTOAQ7RTW8 1153 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 KCPQ6ZWJ8 1503 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 PTPN3P26045 913 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 CDK7P50613 346 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 CNTN1Q12860 1018 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 OLFM3Q96PB7 478 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 C1QTNF7Q9BXJ2 289 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 TMEM161AQ9NX61 479 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 ZNF214Q9UL59 606 aaPredicted RBP20.09■□□□□ 0.81
PCDH8-202ENST00000377942 NCKAP1Q9Y2A7 1128 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 H3BMM5 538 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 PCID2Q5JVF3 399 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 NECAB2Q7Z6G3 386 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 ZNF384Q8TF68 577 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 SUSD6Q92537 303 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 CCDC134Q9H6E4 229 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 LRRC19Q9H756 370 aa20.09■□□□□ 0.81
PCDH8-202ENST00000377942 C16orf96A6NNT2 1141 aa20.08■□□□□ 0.81
PCDH8-202ENST00000377942 ARIH2O95376 493 aa20.08■□□□□ 0.81
PCDH8-202ENST00000377942 ASGR1P07306 291 aa20.08■□□□□ 0.81
PCDH8-202ENST00000377942 SSTR1P30872 391 aa20.08■□□□□ 0.81
PCDH8-202ENST00000377942 POLE2P56282 527 aa20.08■□□□□ 0.81
PCDH8-202ENST00000377942 RAP1GAP2Q684P5 730 aa20.08■□□□□ 0.81
PCDH8-202ENST00000377942 VSTM1Q6UX27 236 aa20.08■□□□□ 0.81
PCDH8-202ENST00000377942 USP45Q70EL2 814 aa20.08■□□□□ 0.81
PCDH8-202ENST00000377942 APOPT1Q96IL0 206 aa20.08■□□□□ 0.81
PCDH8-202ENST00000377942 TTPALQ9BTX7 342 aa20.08■□□□□ 0.81
PCDH8-202ENST00000377942 ACTR8Q9H981 624 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms