RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 PGBD4Q96DM1 585 aa13.57□□□□□ -0.24
ACTN1-202ENST00000376839 FCRL3Q96P31 734 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-202ENST00000376839 MPHOSPH6Q99547 160 aaKnown RBP13.57□□□□□ -0.24
ACTN1-202ENST00000376839 GJD2Q9UKL4 321 aa13.57□□□□□ -0.24
ACTN1-202ENST00000376839 ZSWIM8A7E2V4 1837 aa13.57□□□□□ -0.24
ACTN1-202ENST00000376839 ZNF638Q14966 1978 aaKnown RBP13.57□□□□□ -0.24
ACTN1-202ENST00000376839 DNAJC25-GNG10A0A024R161 153 aa13.57□□□□□ -0.24
ACTN1-202ENST00000376839 DCXO43602 365 aa13.57□□□□□ -0.24
ACTN1-202ENST00000376839 ZBTB14O43829 449 aa13.57□□□□□ -0.24
ACTN1-202ENST00000376839 TOMM70O94826 608 aa13.57□□□□□ -0.24
ACTN1-202ENST00000376839 ALOX15P16050 662 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-202ENST00000376839 ABCG1P45844 678 aa13.57□□□□□ -0.24
ACTN1-202ENST00000376839 ZNF484Q5JVG2 852 aa13.57□□□□□ -0.24
ACTN1-202ENST00000376839 MFN1Q8IWA4 741 aa13.57□□□□□ -0.24
ACTN1-202ENST00000376839 ACTRT2Q8TDY3 377 aa13.57□□□□□ -0.24
ACTN1-202ENST00000376839 SNX15Q9NRS6 342 aa13.57□□□□□ -0.24
ACTN1-202ENST00000376839 SNTG2Q9NY99 539 aa13.57□□□□□ -0.24
ACTN1-202ENST00000376839 HES2Q9Y543 173 aa13.57□□□□□ -0.24
ACTN1-202ENST00000376839 SYNJ2BP-COX16A0A087WUM0 186 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 GRK2P25098 689 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 ARL4AP40617 200 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 HARS2P49590 506 aaKnown RBP13.56□□□□□ -0.24
ACTN1-202ENST00000376839 AQP4P55087 323 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 ARHGAP1Q07960 439 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 CUL3Q13618 768 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 HNRNPDQ14103 355 aaKnown RBP13.56□□□□□ -0.24
ACTN1-202ENST00000376839 NAPRTQ6XQN6 538 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 DCLK2Q8N568 766 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 FAM124BQ9H5Z6 455 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-202ENST00000376839 COX16Q9P0S2 106 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 POMPQ9Y244 141 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 RPS6KL1Q9Y6S9 549 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 PLXNA1Q9UIW2 1896 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 SF3B1O75533 1304 aaKnown RBP eCLIP13.56□□□□□ -0.243e-6■■■■■ 155
ACTN1-202ENST00000376839 HACD1B0YJ81 288 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 E9PBE3 544 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 KLHL41O60662 606 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 USP12O75317 370 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 SNUPNO95149 360 aaKnown RBP13.56□□□□□ -0.24
ACTN1-202ENST00000376839 CPA3P15088 417 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 LMO2P25791 158 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 CALRP27797 417 aaKnown RBP13.56□□□□□ -0.24
ACTN1-202ENST00000376839 TTLL4Q14679 1199 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 KCTD2Q14681 263 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 KYAT1Q16773 422 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 ARHGAP17Q68EM7 881 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 ZNF567Q8N184 647 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 ZNF781Q8N8C0 355 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 CCNYQ8ND76 341 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 AGR3Q8TD06 166 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 CERS2Q96G23 380 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 OTUD5Q96G74 571 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 TRIM4Q9C037 500 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 EIF2B3Q9NR50 452 aaKnown RBP13.56□□□□□ -0.24
ACTN1-202ENST00000376839 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.56□□□□□ -0.24
ACTN1-202ENST00000376839 RBPJLQ9UBG7 517 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 FZD10Q9ULW2 581 aa13.56□□□□□ -0.24
ACTN1-202ENST00000376839 OPHN1O60890 802 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 AP1G2O75843 785 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 ZBTB7AO95365 584 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 GP5P40197 560 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 GRM5P41594 1212 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 RAB27AP51159 221 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 BST2Q10589 180 aaKnown RBP13.55□□□□□ -0.24
ACTN1-202ENST00000376839 DLG2Q15700 870 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 SLC9B1Q4ZJI4 515 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 CFAP157Q5JU67 520 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 ZNF618Q5T7W0 954 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 MAPK15Q8TD08 544 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 GDPD5Q8WTR4 605 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 ZFAND2BQ8WV99 257 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 MOCOSQ96EN8 888 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 FAM192AQ9GZU8 254 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 PRDM12Q9H4Q4 367 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 COG4Q9H9E3 785 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 TXNDC16Q9P2K2 825 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 PACSIN3Q9UKS6 424 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 IRF9Q00978 393 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 DEUP1Q05D60 604 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 TBL3Q12788 808 aaKnown RBP13.55□□□□□ -0.24
ACTN1-202ENST00000376839 INSCQ1MX18 579 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 OTUD1Q5VV17 481 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-202ENST00000376839 ACAD11Q709F0 780 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 DEFB132Q7Z7B7 95 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 NT5DC4Q86YG4 428 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 HACE1Q8IYU2 909 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 DEFB106AQ8N104 65 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 ANKRD52Q8NB46 1076 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 OR52K1Q8NGK4 314 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 CMTM5Q96DZ9 223 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 AGAP3Q96P47 875 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 AGAP2Q99490 1192 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 CAB39LQ9H9S4 337 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 ELP3Q9H9T3 547 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 ACSS2Q9NR19 701 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 ZDHHC7Q9NXF8 308 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 GPRC5DQ9NZD1 345 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 GINS2Q9Y248 185 aa13.55□□□□□ -0.24
ACTN1-202ENST00000376839 KCNK1O00180 336 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 SLC25A27O95847 323 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms