RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 TTC16Q8NEE8 873 aa16.34■□□□□ 0.21
TMEM53-204ENST00000372243 DEPDC1BQ8WUY9 529 aa16.34■□□□□ 0.21
TMEM53-204ENST00000372243 OSCP1Q8WVF1 389 aa16.34■□□□□ 0.21
TMEM53-204ENST00000372243 MAIP1Q8WWC4 291 aa16.34■□□□□ 0.21
TMEM53-204ENST00000372243 IGSF8Q969P0 613 aa16.34■□□□□ 0.21
TMEM53-204ENST00000372243 RPRD1AQ96P16 312 aaPredicted RBP16.34■□□□□ 0.21
TMEM53-204ENST00000372243 THG1LQ9NWX6 298 aaKnown RBP16.34■□□□□ 0.21
TMEM53-204ENST00000372243 DONSONQ9NYP3 566 aa16.34■□□□□ 0.21
TMEM53-204ENST00000372243 NR2E1Q9Y466 385 aa16.34■□□□□ 0.21
TMEM53-204ENST00000372243 ANHXE9PGG2 379 aa16.33■□□□□ 0.2
TMEM53-204ENST00000372243 PGRMC1O00264 195 aaKnown RBP16.33■□□□□ 0.2
TMEM53-204ENST00000372243 DCLK1O15075 740 aa16.33■□□□□ 0.2
TMEM53-204ENST00000372243 FGGP02679 453 aa16.33■□□□□ 0.2
TMEM53-204ENST00000372243 KRT10P13645 584 aa16.33■□□□□ 0.2
TMEM53-204ENST00000372243 ERCC2P18074 760 aa16.33■□□□□ 0.2
TMEM53-204ENST00000372243 MPPE1Q53F39 396 aa16.33■□□□□ 0.2
TMEM53-204ENST00000372243 MPP7Q5T2T1 576 aa16.33■□□□□ 0.2
TMEM53-204ENST00000372243 VITQ6UXI7 678 aa16.33■□□□□ 0.2
TMEM53-204ENST00000372243 RFX6Q8HWS3 928 aa16.33■□□□□ 0.2
TMEM53-204ENST00000372243 ADGRG2Q8IZP9 1017 aa16.33■□□□□ 0.2
TMEM53-204ENST00000372243 PQLC3Q8N755 202 aa16.33■□□□□ 0.2
TMEM53-204ENST00000372243 TDRD5Q8NAT2 981 aaKnown RBP16.33■□□□□ 0.2
TMEM53-204ENST00000372243 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.33■□□□□ 0.2
TMEM53-204ENST00000372243 PRICKLE1Q96MT3 831 aaPredicted RBP16.33■□□□□ 0.2
TMEM53-204ENST00000372243 TMEM248Q9NWD8 314 aa16.33■□□□□ 0.2
TMEM53-204ENST00000372243 MRFAP1Q9Y605 127 aa16.33■□□□□ 0.2
TMEM53-204ENST00000372243 C5orf42Q9H799 3197 aa16.32■□□□□ 0.2
TMEM53-204ENST00000372243 TYW5A2RUC4 315 aaKnown RBP16.32■□□□□ 0.2
TMEM53-204ENST00000372243 APOL1O14791 398 aa16.32■□□□□ 0.2
TMEM53-204ENST00000372243 CST8O60676 142 aa16.32■□□□□ 0.2
TMEM53-204ENST00000372243 AMPD1P23109 780 aa16.32■□□□□ 0.2
TMEM53-204ENST00000372243 PAFAH1B1P43034 410 aa16.32■□□□□ 0.2
TMEM53-204ENST00000372243 ADCY2Q08462 1091 aa16.32■□□□□ 0.2
TMEM53-204ENST00000372243 WHAMMP3Q1A5X7 153 aa16.32■□□□□ 0.2
TMEM53-204ENST00000372243 CCDC181Q5TID7 509 aa16.32■□□□□ 0.2
TMEM53-204ENST00000372243 KAZNQ674X7 775 aa16.32■□□□□ 0.2
TMEM53-204ENST00000372243 PTCRAQ6ISU1 281 aaPredicted RBP16.32■□□□□ 0.2
TMEM53-204ENST00000372243 RWDD4Q6NW29 188 aaKnown RBP16.32■□□□□ 0.2
TMEM53-204ENST00000372243 PARM1Q6UWI2 310 aa16.32■□□□□ 0.2
TMEM53-204ENST00000372243 CHST9Q7L1S5 443 aa16.32■□□□□ 0.2
TMEM53-204ENST00000372243 NLRP14Q86W24 1093 aa16.32■□□□□ 0.2
TMEM53-204ENST00000372243 ZDHHC14Q8IZN3 488 aa16.32■□□□□ 0.2
TMEM53-204ENST00000372243 LZTR1Q8N653 840 aa16.32■□□□□ 0.2
TMEM53-204ENST00000372243 HJURPQ8NCD3 748 aaPredicted RBP16.32■□□□□ 0.2
TMEM53-204ENST00000372243 FGF14Q92915 247 aa16.32■□□□□ 0.2
TMEM53-204ENST00000372243 TMA16Q96EY4 203 aaKnown RBP16.32■□□□□ 0.2
TMEM53-204ENST00000372243 MYEOVQ96EZ4 313 aa16.32■□□□□ 0.2
TMEM53-204ENST00000372243 MS4A14Q96JA4 679 aa16.32■□□□□ 0.2
TMEM53-204ENST00000372243 HERPUD2Q9BSE4 406 aa16.32■□□□□ 0.2
TMEM53-204ENST00000372243 HEMGNQ9BXL5 484 aa16.32■□□□□ 0.2
TMEM53-204ENST00000372243 DUS2Q9NX74 493 aaKnown RBP16.32■□□□□ 0.2
TMEM53-204ENST00000372243 A0A1B0GVM2 712 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 TCAF2A6NFQ2 919 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 SCAMP3O14828 347 aaKnown RBP16.31■□□□□ 0.2
TMEM53-204ENST00000372243 CLDN11O75508 207 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 CYBBP04839 570 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 PSMC3P17980 439 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 TGM2P21980 687 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 SERPINB6P35237 376 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 IFNAR2P48551 515 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 CDH4P55283 916 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 HTR4Q13639 388 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 PAFAH1B3Q15102 231 aaKnown RBP16.31■□□□□ 0.2
TMEM53-204ENST00000372243 PDGFRLQ15198 375 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 LONRF2Q1L5Z9 754 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 RNF43Q68DV7 783 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 NCBP2-AS2Q69YL0 99 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 TMCO3Q6UWJ1 677 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 PLD5Q8N7P1 536 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 RTL3Q8N8U3 475 aaKnown RBP16.31■□□□□ 0.2
TMEM53-204ENST00000372243 TTC13Q8NBP0 860 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 NXPE3Q969Y0 559 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 CAPZA3Q96KX2 299 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 FAM83CQ9BQN1 747 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 LINC00597Q9H2U6 94 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 MPP6Q9NZW5 540 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 MARK1Q9P0L2 795 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 ZNF212Q9UDV6 495 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 WNT6Q9Y6F9 365 aa16.31■□□□□ 0.2
TMEM53-204ENST00000372243 C2CD4DB7Z1M9 353 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 APOC4-APOC2K7ER74 178 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 APOC2P02655 101 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 NR2C2P49116 596 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 MAPKAPK2P49137 400 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 EML3Q32P44 896 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 ALFQ53S48 1182 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 IRF7Q92985 503 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 PLA2G2FQ9BZM2 168 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 L2HGDHQ9H9P8 463 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 SPHK2Q9NRA0 654 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 ETNK2Q9NVF9 386 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 RAD54BQ9Y620 910 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 TRDMT1O14717 391 aaKnown RBP16.3■□□□□ 0.2
TMEM53-204ENST00000372243 CHADO15335 359 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 TSPAN3O60637 253 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 CNTN5O94779 1100 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 NFATC1O95644 943 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 PENKP01210 267 aaPredicted RBP16.3■□□□□ 0.2
TMEM53-204ENST00000372243 IRAK1P51617 712 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 SGSHP51688 502 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms