RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 PARGQ86W56 976 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 EPS8L3Q8TE67 593 aaKnown RBP10.01□□□□□ -0.81
COL4A6-202ENST00000372216 USP7Q93009 1102 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 TBL1YQ9BQ87 522 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 KLHL1Q9NR64 748 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 COQ6Q9Y2Z9 468 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 MEI4A8MW99 385 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 PPP1R37O75864 691 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 FLT3LGP49771 235 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 DLG4P78352 724 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 DSG4Q86SJ6 1040 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 ADI1Q9BV57 179 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 TRIM8Q9BZR9 551 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 ZNF304Q9HCX3 659 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 ZMYM5Q9UJ78 669 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 ST3GAL5Q9UNP4 418 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 TNFSF13BQ9Y275 285 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 E5RJQ4 531 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 TLL1O43897 1013 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 YBX3P16989 372 aaKnown RBP eCLIP10□□□□□ -0.81
COL4A6-202ENST00000372216 LRRC74BQ6ZQY2 392 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 REXO1L1PQ8IX06 675 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 IL31RAQ8NI17 732 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 CMTM5Q96DZ9 223 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 SH3BP4Q9P0V3 963 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 ZNHIT2Q9UHR6 403 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 ERI2A8K979 691 aaKnown RBP10□□□□□ -0.81
COL4A6-202ENST00000372216 KPNA3O00505 521 aaPredicted RBP10□□□□□ -0.81
COL4A6-202ENST00000372216 APOA1P02647 267 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 CRYBB1P53674 252 aaPredicted RBP10□□□□□ -0.81
COL4A6-202ENST00000372216 CSHL1Q14406 222 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 MACC1Q6ZN28 852 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 ACO2Q99798 780 aaKnown RBP10□□□□□ -0.81
COL4A6-202ENST00000372216 SYT17Q9BSW7 474 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 ROGDIQ9GZN7 287 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 ARHGAP20Q9P2F6 1191 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 OPLAHO14841 1288 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 MAPK1P28482 360 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 CBWD6Q4V339 395 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 CBWD3Q5JTY5 395 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 CBWD5Q5RIA9 395 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 GLT6D1Q7Z4J2 308 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 EME1Q96AY2 570 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 CCDC126Q96EE4 140 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 NLNQ9BYT8 704 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 ILKAPQ9H0C8 392 aaPredicted RBP10□□□□□ -0.81
COL4A6-202ENST00000372216 GPAMQ9HCL2 828 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 ZMYM2Q9UBW7 1377 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 IFT172Q9UG01 1749 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 CYP3A7-CYP3A51PA0A087WV96 503 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 O00370 1275 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 HMGCRP04035 888 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 CYP3A7P24462 503 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 CCNG2Q16589 344 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 PABPC1LQ4VXU2 614 aaKnown RBP10□□□□□ -0.81
COL4A6-202ENST00000372216 PARP9Q8IXQ6 854 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 CATSPER1Q8NEC5 780 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 CD99L2Q8TCZ2 262 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 ACTRT1Q8TDG2 376 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 RBBP8Q99708 897 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 ASAH2Q9NR71 780 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 UBA2Q9UBT2 640 aaPredicted RBP10□□□□□ -0.81
COL4A6-202ENST00000372216 CTNNAL1Q9UBT7 734 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 BTBD19C9JJ37 291 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 GJB6O95452 261 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 BCL2L1Q07817 233 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 TRIM71Q2Q1W2 868 aaKnown RBP10□□□□□ -0.81
COL4A6-202ENST00000372216 FAAH2Q6GMR7 532 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 TRAF7Q6Q0C0 670 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 CNDP1Q96KN2 507 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 ABCG4Q9H172 646 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 IMPAD1Q9NX62 359 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 SYBUQ9NX95 663 aa10□□□□□ -0.81
COL4A6-202ENST00000372216 WDR27A2RRH5 827 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 PLA2G4EQ3MJ16 856 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 CRY2Q49AN0 593 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 SLC44A4Q53GD3 710 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 MARCH2Q9P0N8 246 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 COPG1Q9Y678 874 aaKnown RBP9.99□□□□□ -0.81
COL4A6-202ENST00000372216 NR5A2O00482 541 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 GJB1P08034 283 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 ATP5C1P36542 298 aaKnown RBP9.99□□□□□ -0.81
COL4A6-202ENST00000372216 TNFSF9P41273 254 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 XRCC4Q13426 336 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 CAPSQ13938 189 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 OLFML2BQ68BL8 750 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-202ENST00000372216 RPRD1BQ9NQG5 326 aaKnown RBP9.99□□□□□ -0.81
COL4A6-202ENST00000372216 KLHL3Q9UH77 587 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 GPN3Q9UHW5 284 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-202ENST00000372216 DNMT3LQ9UJW3 386 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 ACSL4O60488 711 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 CDH2P19022 906 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-202ENST00000372216 EIF4BP23588 611 aaKnown RBP9.99□□□□□ -0.81
COL4A6-202ENST00000372216 CLK1P49759 484 aaKnown RBP9.99□□□□□ -0.81
COL4A6-202ENST00000372216 TRIM25Q14258 630 aaKnown RBP9.99□□□□□ -0.81
COL4A6-202ENST00000372216 USP41Q3LFD5 358 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 TYW3Q6IPR3 259 aaKnown RBP9.99□□□□□ -0.81
COL4A6-202ENST00000372216 ILDR1Q86SU0 546 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-202ENST00000372216 LRRC6Q86X45 466 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms