RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 FBXO22Q8NEZ5 403 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 RNF217Q8TC41 542 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 ZNF516Q92618 1163 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 ANKRD36BP1Q96IX9 119 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 TSPAN18Q96SJ8 248 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 CGRRF1Q99675 332 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 FAM118BQ9BPY3 351 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 ECSITQ9BQ95 431 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 COLEC11Q9BWP8 271 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 STN1Q9H668 368 aaKnown RBP11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 ALG13Q9NP73 1137 aaKnown RBP11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 NDE1Q9NXR1 346 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 SPG21Q9NZD8 308 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 SLC17A7Q9P2U7 560 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 PLA2G4CQ9UP65 541 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 RWDD3Q9Y3V2 267 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 PCDHB4Q9Y5E5 795 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 IKBKGQ9Y6K9 419 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 COMMD3-BMI1R4GMX3 469 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 PTPRSQ13332 1948 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 I3L4J1 428 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 PPEF2O14830 753 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 FGF18O76093 207 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 TNNC2P02585 160 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 ITGB3P05106 788 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 ITGB1P05556 798 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 KRT7P08729 469 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 MYL2P10916 166 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 ETS1P14921 441 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 CYP3A5P20815 502 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 SSTR1P30872 391 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 CDH5P33151 784 aaPredicted RBP11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 SERPINB4P48594 390 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 ZNF132P52740 706 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 AP3M2P53677 418 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 OVGP1Q12889 678 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 UPP1Q16831 310 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 FOXB2Q5VYV0 432 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 DCLRE1AQ6PJP8 1040 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 ARHGAP22Q7Z5H3 698 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 NT5DC4Q86YG4 428 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 SLC39A11Q8N1S5 342 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 FBXO36Q8NEA4 188 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 FNIP1Q8TF40 1166 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 BCL7CQ8WUZ0 217 aaPredicted RBP11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 FAM210AQ96ND0 272 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 HAPLN3Q96S86 360 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 PI4K2AQ9BTU6 479 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 TTYH1Q9H313 450 aaPredicted RBP11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 EPB41L1Q9H4G0 881 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 PIDD1Q9HB75 910 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 ARHGEF4Q9NR80 690 aa11.79□□□□□ -0.52
TSPAN1-201ENST00000372003 WDR91A4D1P6 747 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 EPOPA6NHQ4 379 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 B2RBV5 119 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 TRDMT1O14717 391 aaKnown RBP11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 PENKP01210 267 aaPredicted RBP11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 POLR2BP30876 1174 aaKnown RBP11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 RPL9P32969 192 aaKnown RBP11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 GJC1P36383 396 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 CCNFP41002 786 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 POLE2P56282 527 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 IRX4P78413 519 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 GPM6BQ13491 265 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 FNBP1LQ5T0N5 605 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 ZFYVE27Q5T4F4 411 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 ZNF697Q5TEC3 545 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 TTC39BQ5VTQ0 682 aaPredicted RBP11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 C9orf57Q5W0N0 161 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 DNAJC24Q6P3W2 148 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 ACAD11Q709F0 780 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 ANKMY2Q8IV38 441 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 ST13P4Q8IZP2 240 aaPredicted RBP11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 UBR7Q8N806 425 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 C1orf127Q8N9H9 656 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 TMEM35BQ8NCS4 154 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 C3orf58Q8NDZ4 430 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 RSAD2Q8WXG1 361 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 TMEM169Q96HH4 297 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 IGSF21Q96ID5 467 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 UROC1Q96N76 676 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 SAMD11Q96NU1 681 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 TMEM121Q9BTD3 319 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 SPATA16Q9BXB7 569 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 FAM96AQ9H5X1 160 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 MARCH5Q9NX47 278 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 NUB1Q9Y5A7 615 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 C3orf70A6NLC5 250 aaPredicted RBP11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 PI4K2BG5E9Z4 385 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 BIRC5O15392 142 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 MAP3K13O43283 966 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 CST3P01034 146 aaPredicted RBP11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 RB1P06400 928 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 SERPINA6P08185 405 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 INHBAP08476 426 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 LRPAP1P30533 357 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 GSTT1P30711 240 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 STIP1P31948 543 aaKnown RBP11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 RPL22P35268 128 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms