RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 ROBO3Q96MS0 1386 aa15.05■□□□□ 0
NDC1-201ENST00000371429 SMIM28A0A1B0GU29 152 aa15.05■□□□□ 0
NDC1-201ENST00000371429 LRRC10BA6NIK2 292 aa15.05■□□□□ 0
NDC1-201ENST00000371429 TBL1XO60907 577 aa15.05■□□□□ 0
NDC1-201ENST00000371429 PPIGQ13427 754 aaKnown RBP eCLIP15.05■□□□□ 0
NDC1-201ENST00000371429 RRP1BQ14684 758 aaKnown RBP15.05■□□□□ 0
NDC1-201ENST00000371429 FAM35AQ86V20 835 aa15.05■□□□□ 0
NDC1-201ENST00000371429 ZNF614Q8N883 585 aa15.05■□□□□ 0
NDC1-201ENST00000371429 CATSPER1Q8NEC5 780 aa15.05■□□□□ 0
NDC1-201ENST00000371429 WDR48Q8TAF3 677 aa15.05■□□□□ 0
NDC1-201ENST00000371429 SHC3Q92529 594 aa15.05■□□□□ 0
NDC1-201ENST00000371429 APBB2Q92870 758 aa15.05■□□□□ 0
NDC1-201ENST00000371429 ZYG11BQ9C0D3 744 aa15.05■□□□□ 0
NDC1-201ENST00000371429 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.05■□□□□ -0
NDC1-201ENST00000371429 CLDN5O00501 218 aa15.05■□□□□ -0
NDC1-201ENST00000371429 USP12O75317 370 aa15.05■□□□□ -0
NDC1-201ENST00000371429 SPATA31D3P0C874 917 aa15.05■□□□□ -0
NDC1-201ENST00000371429 CTSEP14091 401 aa15.05■□□□□ -0
NDC1-201ENST00000371429 SMPD1P17405 629 aa15.05■□□□□ -0
NDC1-201ENST00000371429 PRKCIP41743 596 aa15.05■□□□□ -0
NDC1-201ENST00000371429 MAP3K10Q02779 954 aa15.05■□□□□ -0
NDC1-201ENST00000371429 MAMLD1Q13495 774 aa15.05■□□□□ -0
NDC1-201ENST00000371429 SPATA31D4Q6ZUB0 917 aa15.05■□□□□ -0
NDC1-201ENST00000371429 TNIP2Q8NFZ5 429 aa15.05■□□□□ -0
NDC1-201ENST00000371429 BBS2Q9BXC9 721 aa15.05■□□□□ -0
NDC1-201ENST00000371429 TM6SF2Q9BZW4 377 aa15.05■□□□□ -0
NDC1-201ENST00000371429 UNKQ9C0B0 810 aaKnown RBP15.05■□□□□ -0
NDC1-201ENST00000371429 HPS4Q9NQG7 708 aa15.05■□□□□ -0
NDC1-201ENST00000371429 FAM237AA0A1B0GTK4 181 aa15.05■□□□□ -0
NDC1-201ENST00000371429 PSMD12O00232 456 aaPredicted RBP15.05■□□□□ -0
NDC1-201ENST00000371429 CCNT2O60583 730 aaKnown RBP15.05■□□□□ -0
NDC1-201ENST00000371429 PGAM1P18669 254 aa15.05■□□□□ -0
NDC1-201ENST00000371429 CDC25CP30307 473 aa15.05■□□□□ -0
NDC1-201ENST00000371429 C9orf57Q5W0N0 161 aa15.05■□□□□ -0
NDC1-201ENST00000371429 PDPK2PQ6A1A2 396 aa15.05■□□□□ -0
NDC1-201ENST00000371429 TRAPPC5Q8IUR0 188 aa15.05■□□□□ -0
NDC1-201ENST00000371429 KATNAL2Q8IYT4 538 aa15.05■□□□□ -0
NDC1-201ENST00000371429 C12orf29Q8N999 325 aa15.05■□□□□ -0
NDC1-201ENST00000371429 HJURPQ8NCD3 748 aaPredicted RBP15.05■□□□□ -0
NDC1-201ENST00000371429 ACOX2Q99424 681 aa15.05■□□□□ -0
NDC1-201ENST00000371429 DERAQ9Y315 318 aa15.05■□□□□ -0
NDC1-201ENST00000371429 PCDHA2Q9Y5H9 948 aa15.05■□□□□ -0
NDC1-201ENST00000371429 A0A0B4J269 797 aa15.04■□□□□ -0
NDC1-201ENST00000371429 MAPK8P45983 427 aa15.04■□□□□ -0
NDC1-201ENST00000371429 CCNG1P51959 295 aa15.04■□□□□ -0
NDC1-201ENST00000371429 DUSP4Q13115 394 aa15.04■□□□□ -0
NDC1-201ENST00000371429 XRCC4Q13426 336 aa15.04■□□□□ -0
NDC1-201ENST00000371429 GPR152Q8TDT2 470 aa15.04■□□□□ -0
NDC1-201ENST00000371429 LENG1Q96BZ8 264 aaPredicted RBP15.04■□□□□ -0
NDC1-201ENST00000371429 CNTNAP1P78357 1384 aa15.04■□□□□ -0
NDC1-201ENST00000371429 C1QTNF3-AMACRE9PGA6 284 aa15.04■□□□□ -0
NDC1-201ENST00000371429 FZD9O00144 591 aa15.04■□□□□ -0
NDC1-201ENST00000371429 KRT6AP02538 564 aa15.04■□□□□ -0
NDC1-201ENST00000371429 KRT6BP04259 564 aa15.04■□□□□ -0
NDC1-201ENST00000371429 RPN2P04844 631 aa15.04■□□□□ -0
NDC1-201ENST00000371429 KRT6CP48668 564 aa15.04■□□□□ -0
NDC1-201ENST00000371429 TTC7BQ86TV6 843 aa15.04■□□□□ -0
NDC1-201ENST00000371429 AGGF1Q8N302 714 aaeCLIP15.04■□□□□ -0
NDC1-201ENST00000371429 GAS2L1Q99501 681 aaPredicted RBP15.04■□□□□ -0
NDC1-201ENST00000371429 RMND5AQ9H871 391 aa15.04■□□□□ -0
NDC1-201ENST00000371429 GOLGA2P5Q9HBQ8 144 aa15.04■□□□□ -0
NDC1-201ENST00000371429 NDUFS2O75306 463 aa15.04■□□□□ -0
NDC1-201ENST00000371429 CAPZA2P47755 286 aa15.04■□□□□ -0
NDC1-201ENST00000371429 SEC24CP53992 1094 aa15.04■□□□□ -0
NDC1-201ENST00000371429 CRHR2Q13324 411 aa15.04■□□□□ -0
NDC1-201ENST00000371429 SEL1L3Q68CR1 1132 aa15.04■□□□□ -0
NDC1-201ENST00000371429 CES3Q6UWW8 571 aa15.04■□□□□ -0
NDC1-201ENST00000371429 HORMAD1Q86X24 394 aa15.04■□□□□ -0
NDC1-201ENST00000371429 C7orf61Q8IZ16 206 aa15.04■□□□□ -0
NDC1-201ENST00000371429 ZNF555Q8NEP9 628 aa15.04■□□□□ -0
NDC1-201ENST00000371429 DTX3LQ8TDB6 740 aa15.04■□□□□ -0
NDC1-201ENST00000371429 CXorf40AQ8TE69 158 aa15.04■□□□□ -0
NDC1-201ENST00000371429 HNRNPLLQ8WVV9 542 aaKnown RBP15.04■□□□□ -0
NDC1-201ENST00000371429 SEC16BQ96JE7 1060 aa15.04■□□□□ -0
NDC1-201ENST00000371429 SOWAHBA6NEL2 793 aa15.04■□□□□ -0
NDC1-201ENST00000371429 MOXD2PA6NHM9 499 aa15.04■□□□□ -0
NDC1-201ENST00000371429 RAD51BO15315 384 aa15.04■□□□□ -0
NDC1-201ENST00000371429 PJA2O43164 708 aa15.04■□□□□ -0
NDC1-201ENST00000371429 PECAM1P16284 738 aaPredicted RBP15.04■□□□□ -0
NDC1-201ENST00000371429 SERPINH1P50454 418 aaKnown RBP15.04■□□□□ -0
NDC1-201ENST00000371429 ILF2Q12905 390 aaKnown RBP15.04■□□□□ -0
NDC1-201ENST00000371429 SLC22A9Q8IVM8 553 aa15.04■□□□□ -0
NDC1-201ENST00000371429 UPF1Q92900 1129 aaKnown RBP eCLIP15.04■□□□□ -0
NDC1-201ENST00000371429 EME1Q96AY2 570 aa15.04■□□□□ -0
NDC1-201ENST00000371429 AHCYL2Q96HN2 611 aaKnown RBP15.04■□□□□ -0
NDC1-201ENST00000371429 CNGB3Q9NQW8 809 aa15.04■□□□□ -0
NDC1-201ENST00000371429 H2AFY2Q9P0M6 372 aaPredicted RBP15.04■□□□□ -0
NDC1-201ENST00000371429 HPGDP15428 266 aa15.03■□□□□ -0
NDC1-201ENST00000371429 ICAM3P32942 547 aa15.03■□□□□ -0
NDC1-201ENST00000371429 MAGEA9P43362 315 aa15.03■□□□□ -0
NDC1-201ENST00000371429 SMARCB1Q12824 385 aa15.03■□□□□ -0
NDC1-201ENST00000371429 ECM1Q16610 540 aa15.03■□□□□ -0
NDC1-201ENST00000371429 TRPM8Q7Z2W7 1104 aa15.03■□□□□ -0
NDC1-201ENST00000371429 MON1AQ86VX9 555 aa15.03■□□□□ -0
NDC1-201ENST00000371429 LONP2Q86WA8 852 aa15.03■□□□□ -0
NDC1-201ENST00000371429 SNRNP25Q9BV90 132 aaKnown RBP15.03■□□□□ -0
NDC1-201ENST00000371429 MYO1CO00159 1063 aa15.03■□□□□ -0
NDC1-201ENST00000371429 TRDMT1O14717 391 aaKnown RBP15.03■□□□□ -0
NDC1-201ENST00000371429 SEC24DO94855 1032 aaPredicted RBP15.03■□□□□ -0
NDC1-201ENST00000371429 GRK2P25098 689 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms