RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 LRIG2O94898 1065 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 L1CAMP32004 1257 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 SLC1A1P43005 524 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 TPI1P60174 286 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 PRKCQQ04759 706 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 KRT81Q14533 505 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 UBXN2BQ14CS0 331 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 GRAMD4Q6IC98 578 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 C11orf63Q6NUN7 778 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 TRIM67Q6ZTA4 783 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 TFAP2DQ7Z6R9 452 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 MFN1Q8IWA4 741 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 CCDC117Q8IWD4 279 aaPredicted RBP14.33□□□□□ -0.12
TPM3-211ENST00000368531 CCAR2Q8N163 923 aaKnown RBP14.33□□□□□ -0.12
TPM3-211ENST00000368531 WFDC5Q8TCV5 224 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 CD101Q93033 1021 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 TBC1D31Q96DN5 1066 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 SHDQ96IW2 340 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 PNKPQ96T60 521 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 EPAS1Q99814 870 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 MFSD1Q9H3U5 465 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 EPHX3Q9H6B9 360 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 ARHGEF4Q9NR80 690 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.33□□□□□ -0.12
TPM3-211ENST00000368531 DEC1Q9P2X7 70 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 CAPN6Q9Y6Q1 641 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.32□□□□□ -0.12
TPM3-211ENST00000368531 SHISA7A6NL88 538 aa14.32□□□□□ -0.12
TPM3-211ENST00000368531 EEF2KO00418 725 aaKnown RBP14.32□□□□□ -0.12
TPM3-211ENST00000368531 MAN2B1O00754 1011 aa14.32□□□□□ -0.12
TPM3-211ENST00000368531 DAPK3O43293 454 aa14.32□□□□□ -0.12
TPM3-211ENST00000368531 LUC7L3O95232 432 aaKnown RBP14.32□□□□□ -0.12
TPM3-211ENST00000368531 FTCDO95954 541 aa14.32□□□□□ -0.12
TPM3-211ENST00000368531 PDGFBP01127 241 aaPredicted RBP14.32□□□□□ -0.12
TPM3-211ENST00000368531 KRT7P08729 469 aa14.32□□□□□ -0.12
TPM3-211ENST00000368531 GLULP15104 373 aa14.32□□□□□ -0.12
TPM3-211ENST00000368531 EPHB2P29323 1055 aa14.32□□□□□ -0.12
TPM3-211ENST00000368531 DGKGP49619 791 aa14.32□□□□□ -0.12
TPM3-211ENST00000368531 CDH6P55285 790 aa14.32□□□□□ -0.12
TPM3-211ENST00000368531 MESP2Q0VG99 397 aa14.32□□□□□ -0.12
TPM3-211ENST00000368531 ZNF177Q13360 481 aaPredicted RBP14.32□□□□□ -0.12
TPM3-211ENST00000368531 CDH18Q13634 790 aa14.32□□□□□ -0.12
TPM3-211ENST00000368531 ASTLQ6HA08 431 aaPredicted RBP14.32□□□□□ -0.12
TPM3-211ENST00000368531 ZNF852Q6ZMS4 543 aa14.32□□□□□ -0.12
TPM3-211ENST00000368531 SFTPA1Q8IWL2 248 aa14.32□□□□□ -0.12
TPM3-211ENST00000368531 RHOT1Q8IXI2 618 aa14.32□□□□□ -0.12
TPM3-211ENST00000368531 ETFBKMTQ8IXQ9 262 aa14.32□□□□□ -0.12
TPM3-211ENST00000368531 RNF10Q8N5U6 811 aaKnown RBP14.32□□□□□ -0.12
TPM3-211ENST00000368531 KCTD6Q8NC69 237 aa14.32□□□□□ -0.12
TPM3-211ENST00000368531 FLCNQ8NFG4 579 aa14.32□□□□□ -0.12
TPM3-211ENST00000368531 TEKT4Q8WW24 435 aa14.32□□□□□ -0.12
TPM3-211ENST00000368531 CALR3Q96L12 384 aaKnown RBP14.32□□□□□ -0.12
TPM3-211ENST00000368531 FOXQ1Q9C009 403 aa14.32□□□□□ -0.12
TPM3-211ENST00000368531 ZYG11BQ9C0D3 744 aa14.32□□□□□ -0.12
TPM3-211ENST00000368531 TBC1D17Q9HA65 648 aa14.32□□□□□ -0.12
TPM3-211ENST00000368531 MTF2Q9Y483 593 aaPredicted RBP14.32□□□□□ -0.12
TPM3-211ENST00000368531 IGLV3-10A0A075B6K4 115 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 A0A1B0GVM2 712 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 TBC1D3BA6NDS4 549 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 TCAF2A6NFQ2 919 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 TMEM221A6NGB7 291 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 DRGXA6NNA5 263 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.31□□□□□ -0.12
TPM3-211ENST00000368531 PI4K2BG5E9Z4 385 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 M0R296 226 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 ZSCAN12O43309 604 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 EGFP01133 1207 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 APODP05090 189 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 CISD3P0C7P0 127 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 GOT1P17174 413 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 CD70P32970 193 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 CDH4P55283 916 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 STARD6P59095 220 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 NRG1Q02297 640 aaPredicted RBP14.31□□□□□ -0.12
TPM3-211ENST00000368531 MMRN1Q13201 1228 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 SEMA3BQ13214 749 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 C5orf22Q49AR2 442 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 ODF2Q5BJF6 829 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 FSCBQ5H9T9 825 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 MPP7Q5T2T1 576 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 ARTNQ5T4W7 220 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 ACBD5Q5T8D3 534 aaPredicted RBP14.31□□□□□ -0.12
TPM3-211ENST00000368531 MANEALQ5VSG8 457 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 TTC39BQ5VTQ0 682 aaPredicted RBP14.31□□□□□ -0.12
TPM3-211ENST00000368531 FSTL4Q6MZW2 842 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 PEX26Q7Z412 305 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 PSTKQ8IV42 348 aaKnown RBP14.31□□□□□ -0.12
TPM3-211ENST00000368531 REXO1L1PQ8IX06 675 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 SYCE1Q8N0S2 351 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 LRRC57Q8N9N7 239 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 CALN1Q9BXU9 219 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 IRX2Q9BZI1 471 aaPredicted RBP14.31□□□□□ -0.12
TPM3-211ENST00000368531 PCDH18Q9HCL0 1135 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 ABCB8Q9NUT2 735 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 CWC15Q9P013 229 aaKnown RBP14.31□□□□□ -0.12
TPM3-211ENST00000368531 DNAI1Q9UI46 699 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 AMFRQ9UKV5 643 aa14.31□□□□□ -0.12
TPM3-211ENST00000368531 PACSIN2Q9UNF0 486 aaPredicted RBP14.31□□□□□ -0.12
TPM3-211ENST00000368531 KANSL1LA0AUZ9 987 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 LRRD1A4D1F6 860 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms