RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 PPP1R14BQ96C90 147 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 PHF21BQ96EK2 531 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 THUMPD3Q9BV44 507 aaKnown RBP16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 KIAA1257Q9ULG3 409 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 PCDHA11Q9Y5I1 949 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 SUPT3HB4E1H0 165 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 E5RI56 91 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 PMPCBO75439 489 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 CDH8P55286 799 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 ACOT1Q86TX2 421 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 SLC7A14Q8TBB6 771 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 OSBPL6Q9BZF3 934 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 BCAS3Q9H6U6 928 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 TRNAU1APQ9NX07 287 aaKnown RBP16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 PTGES3LE9PB15 166 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 BAIAP3O94812 1187 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 MFN2O95140 757 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 ASLP04424 464 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 KRR1Q13601 381 aaKnown RBP16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 MOGSQ13724 837 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 KYAT1Q16773 422 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 VWA5B1Q5TIE3 1220 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 ABRAXAS1Q6UWZ7 409 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 PACS1Q6VY07 963 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 PANX3Q96QZ0 392 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 TMX2Q9Y320 296 aa16.32■□□□□ 0.2
CLSTN1-201ENST00000361311 SPDYE2BA6NHP3 402 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 VAPBO95292 243 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 GSNP06396 782 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 SPDYE6P0CI01 402 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 MMP8P22894 467 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 PSMB9P28065 219 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 GTF2H3Q13889 308 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 PRKD1Q15139 912 aaPredicted RBP16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 CCDC85BQ15834 202 aaPredicted RBP16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 RNF157Q96PX1 679 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 EGFL8Q99944 293 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 KCTD14Q9BQ13 255 aaPredicted RBP16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 EBF4Q9BQW3 602 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 WDR55Q9H6Y2 383 aaPredicted RBP16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 RIC8BQ9NVN3 520 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 MYH15Q9Y2K3 1946 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 CLUHO75153 1309 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 GOLGA8TH3BQL2 631 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 RNF103O00237 685 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 C15orf59Q2T9L4 293 aaPredicted RBP16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 RNF145Q96MT1 663 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 UBE2OQ9C0C9 1292 aaKnown RBP16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 RAD21L1Q9H4I0 556 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 USP12O75317 370 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 CDKN2BP42772 138 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 KLHDC10Q6PID8 442 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 HORMAD1Q86X24 394 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 ARL10Q8N8L6 244 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 NSMCE2Q96MF7 247 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 CIB1Q99828 191 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 PDCD2LQ9BRP1 358 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 CDH19Q9H159 772 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 UBP1Q9NZI7 540 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 FETUBQ9UGM5 382 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 CAB39Q9Y376 341 aaPredicted RBP16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 RAP2CQ9Y3L5 183 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 ASTN2O75129 1339 aaPredicted RBP16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 M0QYT0 321 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 RBP1P09455 135 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 TPH1P17752 444 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 DSG3P32926 999 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 MAP3K10Q02779 954 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 TSTA3Q13630 321 aaPredicted RBP16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 SLC35G1Q2M3R5 365 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 UNC5AQ6ZN44 842 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 MON1BQ7L1V2 547 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 DSELQ8IZU8 1212 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 SYTL5Q8TDW5 730 aaPredicted RBP16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 LENG8Q96PV6 779 aaPredicted RBP16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 TXLNGYQ9BZA5 131 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 SP110Q9HB58 689 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 SLC8A2Q9UPR5 921 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 NDUFAF1Q9Y375 327 aa16.31■□□□□ 0.2
CLSTN1-201ENST00000361311 KCNK1O00180 336 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 CCNG1P51959 295 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 EGFLAMQ63HQ2 1017 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 ZNF560Q96MR9 790 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 ZDHHC15Q96MV8 337 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 SPATA33Q96N06 139 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 EPS8L2Q9H6S3 715 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 TMA7Q9Y2S6 64 aaKnown RBP16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 AKAP12Q02952 1782 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 RAD23AP54725 363 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 PRMT9Q6P2P2 845 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 SFRP1Q8N474 314 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 LRRN4Q8WUT4 740 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 TCF12Q99081 682 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 RBBP8Q99708 897 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 TEX13BQ9BXU2 312 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 SPAG4Q9NPE6 437 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 TUBA8Q9NY65 449 aaPredicted RBP16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 CNTNAP4Q9C0A0 1308 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 SNHG28P0DPA3 235 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms