RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 SLC44A3Q8N4M1 653 aa2.01□□□□□ -2.09
SMARCAD1-202ENST00000359052 PPM1NQ8N819 430 aa2.01□□□□□ -2.09
SMARCAD1-202ENST00000359052 FBLIM1Q8WUP2 373 aa2.01□□□□□ -2.09
SMARCAD1-202ENST00000359052 SCARF2Q96GP6 870 aaPredicted RBP2.01□□□□□ -2.09
SMARCAD1-202ENST00000359052 DSCC1Q9BVC3 393 aa2.01□□□□□ -2.09
SMARCAD1-202ENST00000359052 SLC26A6Q9BXS9 759 aa2.01□□□□□ -2.09
SMARCAD1-202ENST00000359052 FUT8Q9BYC5 575 aa2.01□□□□□ -2.09
SMARCAD1-202ENST00000359052 IKZF4Q9H2S9 585 aa2.01□□□□□ -2.09
SMARCAD1-202ENST00000359052 QPCTLQ9NXS2 382 aa2.01□□□□□ -2.09
SMARCAD1-202ENST00000359052 PCDHA6Q9UN73 950 aa2.01□□□□□ -2.09
SMARCAD1-202ENST00000359052 ZNF644Q9H582 1327 aaPredicted RBP2.01□□□□□ -2.09
SMARCAD1-202ENST00000359052 TRPM7Q96QT4 1865 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 PFASO15067 1338 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 SERINC4A6NH21 518 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 ASB14A6NK59 587 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 SAC3D1A6NKF1 404 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 CLEC3AO75596 197 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 H2AFXP16104 143 aaPredicted RBP2□□□□□ -2.09
SMARCAD1-202ENST00000359052 ZNF157P51786 506 aaPredicted RBP2□□□□□ -2.09
SMARCAD1-202ENST00000359052 YARSP54577 528 aaKnown RBP2□□□□□ -2.09
SMARCAD1-202ENST00000359052 SCAND1P57086 179 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 STK4Q13043 487 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 PPIGQ13427 754 aaKnown RBP eCLIP2□□□□□ -2.09
SMARCAD1-202ENST00000359052 BTG3Q14201 252 aaPredicted RBP2□□□□□ -2.09
SMARCAD1-202ENST00000359052 TNIP1Q15025 636 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 RPE65Q16518 533 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 IQCCQ4KMZ1 466 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 KLHL26Q53HC5 615 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 RNFT1Q5M7Z0 435 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 CBWD5Q5RIA9 395 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 AP1ARQ63HQ0 302 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 TBC1D9BQ66K14 1250 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 ARL6IP4Q66PJ3 421 aaKnown RBP2□□□□□ -2.09
SMARCAD1-202ENST00000359052 SLC25A24Q6NUK1 477 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 EXOC3L1Q86VI1 746 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 SPACA3Q8IXA5 215 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 SYTL1Q8IYJ3 562 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 ZNF655Q8N720 491 aaPredicted RBP2□□□□□ -2.09
SMARCAD1-202ENST00000359052 OR10S1Q8NGN2 331 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 NUP133Q8WUM0 1156 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 MAGEB10Q96LZ2 347 aaPredicted RBP2□□□□□ -2.09
SMARCAD1-202ENST00000359052 NSUN5Q96P11 429 aaKnown RBP2□□□□□ -2.09
SMARCAD1-202ENST00000359052 FCRL4Q96PJ5 515 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 SLC2A13Q96QE2 648 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 DPYSL5Q9BPU6 564 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 RTKNQ9BST9 563 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 SPATA5L1Q9BVQ7 753 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 HIPK3Q9H422 1215 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 CBX8Q9HC52 389 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 CTNNA3Q9UI47 895 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 ZNF232Q9UNY5 417 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 MYH8P13535 1937 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 LAMA2P24043 3122 aaKnown RBP2□□□□□ -2.09
SMARCAD1-202ENST00000359052 TO15178 435 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 LANCL1O43813 399 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 KHDRBS3O75525 346 aaKnown RBP2□□□□□ -2.09
SMARCAD1-202ENST00000359052 RPS6KA4O75676 772 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 ZSCAN22P10073 491 aaPredicted RBP2□□□□□ -2.09
SMARCAD1-202ENST00000359052 PTAFRP25105 342 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 MAPK9P45984 424 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 RABIFP47224 123 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 KCNAB2Q13303 367 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 GRAPQ13588 217 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 SLC4A8Q2Y0W8 1093 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 HSDL1Q3SXM5 330 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 AMOTQ4VCS5 1084 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 ZNF648Q5T619 568 aaPredicted RBP2□□□□□ -2.09
SMARCAD1-202ENST00000359052 PIK3AP1Q6ZUJ8 805 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 TMEM200AQ86VY9 491 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 SLC15A3Q8IY34 581 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 SLC4A11Q8NBS3 891 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 SNX19Q92543 992 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 IP6K1Q92551 441 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 RAB7BQ96AH8 199 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 SLC41A3Q96GZ6 507 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 CDK5RAP3Q96JB5 506 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 MUS81Q96NY9 551 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 CDK19Q9BWU1 502 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 XYLT2Q9H1B5 865 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 ZBTB40Q9NUA8 1239 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 CDH7Q9ULB5 785 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 DUSP12Q9UNI6 340 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 EXOC6BQ9Y2D4 811 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 CAPN7Q9Y6W3 813 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 NLRC5Q86WI3 1866 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 COL4A5P29400 1685 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 TCRBV5S2A0A599 114 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 C5orf60A6NFR6 353 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 TMEM233B4DJY2 109 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 TRIM13O60858 407 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 ARHGEF15O94989 841 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 ALBP02768 609 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 CRYGCP07315 174 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 SLC19A1P41440 591 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 PPP2R5CQ13362 524 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 TNFAIP1Q13829 316 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 PLA1AQ53H76 456 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 CCDC158Q5M9N0 1113 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 PRAMEF14Q5SWL7 426 aa2□□□□□ -2.09
SMARCAD1-202ENST00000359052 DDX53Q86TM3 631 aaKnown RBP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms