RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 RNF19BQ6ZMZ0 732 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 RFX8Q6ZV50 586 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 NLRP14Q86W24 1093 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 CCNYQ8ND76 341 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 CELF6Q96J87 481 aaKnown RBP13.03□□□□□ -0.32
GGPS1-202ENST00000358966 WDCPQ9H6R7 721 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 VPS37BQ9H9H4 285 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 KANSL3Q9P2N6 904 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 CHMP2BQ9UQN3 213 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 HMGB1P1B2RPK0 211 aaPredicted RBP13.02□□□□□ -0.32
GGPS1-202ENST00000358966 DIAPH2O60879 1101 aa13.02□□□□□ -0.32
GGPS1-202ENST00000358966 VNN2O95498 520 aa13.02□□□□□ -0.32
GGPS1-202ENST00000358966 ABL2P42684 1182 aa13.02□□□□□ -0.32
GGPS1-202ENST00000358966 SCTRP47872 440 aa13.02□□□□□ -0.32
GGPS1-202ENST00000358966 PM20D1Q6GTS8 502 aa13.02□□□□□ -0.32
GGPS1-202ENST00000358966 DENND5BQ6ZUT9 1274 aa13.02□□□□□ -0.32
GGPS1-202ENST00000358966 TRMT10CQ7L0Y3 403 aaKnown RBP13.02□□□□□ -0.32
GGPS1-202ENST00000358966 NPAS4Q8IUM7 802 aa13.02□□□□□ -0.32
GGPS1-202ENST00000358966 PPIL6Q8IXY8 311 aa13.02□□□□□ -0.32
GGPS1-202ENST00000358966 MLXIPLQ9NP71 852 aa13.02□□□□□ -0.32
GGPS1-202ENST00000358966 GGA2Q9UJY4 613 aa13.02□□□□□ -0.32
GGPS1-202ENST00000358966 RGS16O15492 202 aaPredicted RBP13.02□□□□□ -0.33
GGPS1-202ENST00000358966 ACRP10323 421 aa13.02□□□□□ -0.33
GGPS1-202ENST00000358966 ERCC2P18074 760 aa13.02□□□□□ -0.33
GGPS1-202ENST00000358966 MGAT5BQ3V5L5 792 aa13.02□□□□□ -0.33
GGPS1-202ENST00000358966 C4orf50Q6ZRC1 276 aa13.02□□□□□ -0.33
GGPS1-202ENST00000358966 GIPC2Q8TF65 315 aa13.02□□□□□ -0.33
GGPS1-202ENST00000358966 PAWRQ96IZ0 340 aaKnown RBP13.02□□□□□ -0.33
GGPS1-202ENST00000358966 SELENOSQ9BQE4 189 aa13.02□□□□□ -0.33
GGPS1-202ENST00000358966 OSBPL1AQ9BXW6 950 aa13.02□□□□□ -0.33
GGPS1-202ENST00000358966 ETNK1Q9HBU6 452 aa13.02□□□□□ -0.33
GGPS1-202ENST00000358966 PCMTD2Q9NV79 361 aa13.02□□□□□ -0.33
GGPS1-202ENST00000358966 OR12D3Q9UGF7 316 aa13.02□□□□□ -0.33
GGPS1-202ENST00000358966 FBXW11Q9UKB1 542 aa13.02□□□□□ -0.33
GGPS1-202ENST00000358966 CLUHO75153 1309 aa13.02□□□□□ -0.33
GGPS1-202ENST00000358966 TANC1Q9C0D5 1861 aa13.02□□□□□ -0.33
GGPS1-202ENST00000358966 DPPA5A6NC42 116 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 POC1B-GALNT4F8VUJ3 575 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 LRIG2O94898 1065 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 GPX6P59796 221 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 TPI1P60174 286 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 DEFB103AP81534 67 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 CAV1Q03135 178 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 DUSP4Q13115 394 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 FBXO36Q8NEA4 188 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 CCHCR1Q8TD31 782 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 C17orf50Q8WW18 174 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 VN1R3Q9BXE9 311 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 PRDM12Q9H4Q4 367 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 GMIPQ9P107 970 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 SHOC2Q9UQ13 582 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 CDY1Q9Y6F8 540 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 EPHB2P29323 1055 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 DPYSQ14117 519 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 LRRC26Q2I0M4 334 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 BTBD8Q5XKL5 378 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 RWDD4Q6NW29 188 aaKnown RBP13.01□□□□□ -0.33
GGPS1-202ENST00000358966 ANKRD33Q7Z3H0 272 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 BBOF1Q8ND07 529 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 PHC3Q8NDX5 983 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 TMEM39AQ9NV64 488 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 NDFIP2Q9NV92 336 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 WBP1LQ9NX94 342 aa13.01□□□□□ -0.33
GGPS1-202ENST00000358966 MAGED2Q9UNF1 606 aaPredicted RBP13.01□□□□□ -0.33
GGPS1-202ENST00000358966 PATJQ8NI35 1801 aa13□□□□□ -0.33
GGPS1-202ENST00000358966 TMEM189-UBE2V1I3L0A0 370 aa13□□□□□ -0.33
GGPS1-202ENST00000358966 TRAPPC3O43617 180 aa13□□□□□ -0.33
GGPS1-202ENST00000358966 CSF2RAP15509 400 aa13□□□□□ -0.33
GGPS1-202ENST00000358966 EIF3BP55884 814 aaKnown RBP13□□□□□ -0.33
GGPS1-202ENST00000358966 CRADDP78560 199 aa13□□□□□ -0.33
GGPS1-202ENST00000358966 MAPRE1Q15691 268 aaKnown RBP13□□□□□ -0.33
GGPS1-202ENST00000358966 SLC45A4Q5BKX6 768 aa13□□□□□ -0.33
GGPS1-202ENST00000358966 HEATR6Q6AI08 1181 aaKnown RBP13□□□□□ -0.33
GGPS1-202ENST00000358966 KDM7AQ6ZMT4 941 aa13□□□□□ -0.33
GGPS1-202ENST00000358966 HOOK3Q86VS8 718 aa13□□□□□ -0.33
GGPS1-202ENST00000358966 MIB1Q86YT6 1006 aa13□□□□□ -0.33
GGPS1-202ENST00000358966 AUTS2Q8WXX7 1259 aa13□□□□□ -0.33
GGPS1-202ENST00000358966 OLFM3Q96PB7 478 aa13□□□□□ -0.33
GGPS1-202ENST00000358966 SF3B1O75533 1304 aaKnown RBP eCLIP13□□□□□ -0.339e-6■■■■■ 68.9
GGPS1-202ENST00000358966 HMBSP08397 361 aa13□□□□□ -0.33
GGPS1-202ENST00000358966 STIP1P31948 543 aaKnown RBP13□□□□□ -0.33
GGPS1-202ENST00000358966 KCNJ11Q14654 390 aa13□□□□□ -0.33
GGPS1-202ENST00000358966 ARHGAP36Q6ZRI8 547 aa13□□□□□ -0.33
GGPS1-202ENST00000358966 MIPOL1Q8TD10 442 aa13□□□□□ -0.33
GGPS1-202ENST00000358966 TLCD1Q96CP7 247 aa13□□□□□ -0.33
GGPS1-202ENST00000358966 ARPC5LQ9BPX5 153 aa13□□□□□ -0.33
GGPS1-202ENST00000358966 NOP53Q9NZM5 478 aaKnown RBP13□□□□□ -0.33
GGPS1-202ENST00000358966 MTMR11A4FU01 709 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 H3BRJ5 948 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 DCLK1O15075 740 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 FAM107AO95990 144 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 GCAP28676 217 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 ELK3P41970 407 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 CXCR3P49682 368 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 MXRA7P84157 204 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 SEMA3BQ13214 749 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 TMED2Q15363 201 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 ZNF280DQ6N043 979 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 CENPUQ71F23 418 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 MPP5Q8N3R9 675 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms