RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 VCXQ9H320 206 aa14.59□□□□□ -0.07
SIRPA-202ENST00000358771 MANSC4A6NHS7 340 aaPredicted RBP14.59□□□□□ -0.07
SIRPA-202ENST00000358771 SPTLC1O15269 473 aa14.59□□□□□ -0.07
SIRPA-202ENST00000358771 MTSS1O43312 755 aa14.59□□□□□ -0.07
SIRPA-202ENST00000358771 TOP3BO95985 862 aaKnown RBP14.59□□□□□ -0.07
SIRPA-202ENST00000358771 SOX11P35716 441 aa14.59□□□□□ -0.07
SIRPA-202ENST00000358771 HIC1Q14526 733 aa14.59□□□□□ -0.07
SIRPA-202ENST00000358771 KCNMB4Q86W47 210 aa14.59□□□□□ -0.07
SIRPA-202ENST00000358771 EFHBQ8N7U6 833 aa14.59□□□□□ -0.07
SIRPA-202ENST00000358771 OXNAD1Q96HP4 312 aaPredicted RBP14.59□□□□□ -0.07
SIRPA-202ENST00000358771 MAF1Q9H063 256 aa14.59□□□□□ -0.07
SIRPA-202ENST00000358771 ZNF395Q9H8N7 513 aaPredicted RBP14.59□□□□□ -0.07
SIRPA-202ENST00000358771 MPP6Q9NZW5 540 aa14.59□□□□□ -0.07
SIRPA-202ENST00000358771 PTPN4P29074 926 aa14.59□□□□□ -0.07
SIRPA-202ENST00000358771 L1CAMP32004 1257 aa14.59□□□□□ -0.07
SIRPA-202ENST00000358771 CCR1P32246 355 aa14.59□□□□□ -0.07
SIRPA-202ENST00000358771 CDH5P33151 784 aaPredicted RBP14.59□□□□□ -0.07
SIRPA-202ENST00000358771 PARP6Q2NL67 630 aa14.59□□□□□ -0.07
SIRPA-202ENST00000358771 CTXN3Q4LDR2 81 aa14.59□□□□□ -0.07
SIRPA-202ENST00000358771 FSCBQ5H9T9 825 aa14.59□□□□□ -0.07
SIRPA-202ENST00000358771 TEKT4Q8WW24 435 aa14.59□□□□□ -0.07
SIRPA-202ENST00000358771 FBXO32Q969P5 355 aa14.59□□□□□ -0.07
SIRPA-202ENST00000358771 ATP6V1E2Q96A05 226 aa14.59□□□□□ -0.07
SIRPA-202ENST00000358771 RUVBL2Q9Y230 463 aaKnown RBP14.59□□□□□ -0.07
SIRPA-202ENST00000358771 CSH1P0DML2 217 aa14.58□□□□□ -0.07
SIRPA-202ENST00000358771 CSH2P0DML3 217 aa14.58□□□□□ -0.07
SIRPA-202ENST00000358771 PGAM1P18669 254 aa14.58□□□□□ -0.07
SIRPA-202ENST00000358771 PROZP22891 400 aa14.58□□□□□ -0.07
SIRPA-202ENST00000358771 SERPINB5P36952 375 aa14.58□□□□□ -0.07
SIRPA-202ENST00000358771 PLK1P53350 603 aa14.58□□□□□ -0.07
SIRPA-202ENST00000358771 FAM187BQ17R55 369 aa14.58□□□□□ -0.07
SIRPA-202ENST00000358771 RNF180Q86T96 592 aa14.58□□□□□ -0.07
SIRPA-202ENST00000358771 TMEM110Q86TL2 294 aa14.58□□□□□ -0.07
SIRPA-202ENST00000358771 CCDC97Q96F63 343 aaPredicted RBP14.58□□□□□ -0.07
SIRPA-202ENST00000358771 ADA2Q9NZK5 511 aa14.58□□□□□ -0.07
SIRPA-202ENST00000358771 TRDMT1O14717 391 aaKnown RBP14.58□□□□□ -0.08
SIRPA-202ENST00000358771 MDM4O15151 490 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 ZBTB48P10074 688 aaPredicted RBP14.58□□□□□ -0.08
SIRPA-202ENST00000358771 CYP3A5P20815 502 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 MAXP61244 160 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 SOX4Q06945 474 aaPredicted RBP14.58□□□□□ -0.08
SIRPA-202ENST00000358771 DDR2Q16832 855 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 PTAR1Q7Z6K3 402 aaPredicted RBP14.58□□□□□ -0.08
SIRPA-202ENST00000358771 AZIN2Q96A70 460 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 LRRC39Q96DD0 335 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 CERS2Q96G23 380 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 SLC4A5Q9BY07 1137 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 NMRK2Q9NPI5 230 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 MAN1C1Q9NR34 630 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 DCDC2Q9UHG0 476 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 PADI3Q9ULW8 664 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 COL11A2P13942 1736 aaPredicted RBP14.58□□□□□ -0.08
SIRPA-202ENST00000358771 ELF1P32519 619 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 SLC1A6P48664 564 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 ATN1P54259 1190 aaPredicted RBP14.58□□□□□ -0.08
SIRPA-202ENST00000358771 KIF19Q2TAC6 998 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 RNF43Q68DV7 783 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 STRADAQ7RTN6 431 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 MFSD3Q96ES6 412 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 TMA16Q96EY4 203 aaKnown RBP14.58□□□□□ -0.08
SIRPA-202ENST00000358771 PACSIN3Q9UKS6 424 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 SLC12A8A0AV02 714 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 PRPF4O43172 522 aaKnown RBP eCLIP14.58□□□□□ -0.08
SIRPA-202ENST00000358771 ALADP13716 330 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 HOXA11P31270 313 aaPredicted RBP14.58□□□□□ -0.08
SIRPA-202ENST00000358771 KPNA2P52292 529 aaKnown RBP14.58□□□□□ -0.08
SIRPA-202ENST00000358771 MAPRE1Q15691 268 aaKnown RBP14.58□□□□□ -0.08
SIRPA-202ENST00000358771 SH2D4BQ5SQS7 431 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 FAM171A1Q5VUB5 890 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 C6orf89Q6UWU4 347 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 OSTM1Q86WC4 334 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 DCP1BQ8IZD4 617 aaKnown RBP14.58□□□□□ -0.08
SIRPA-202ENST00000358771 PQLC3Q8N755 202 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 COLEC11Q9BWP8 271 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 CHKBQ9Y259 395 aa14.58□□□□□ -0.08
SIRPA-202ENST00000358771 BRWD3Q6RI45 1802 aa14.57□□□□□ -0.08
SIRPA-202ENST00000358771 TKTP29401 623 aaKnown RBP14.57□□□□□ -0.08
SIRPA-202ENST00000358771 PAPOLAP51003 745 aaKnown RBP14.57□□□□□ -0.08
SIRPA-202ENST00000358771 TTC7BQ86TV6 843 aa14.57□□□□□ -0.08
SIRPA-202ENST00000358771 CCNJLQ8IV13 435 aa14.57□□□□□ -0.08
SIRPA-202ENST00000358771 PSTKQ8IV42 348 aaKnown RBP14.57□□□□□ -0.08
SIRPA-202ENST00000358771 TRIM62Q9BVG3 475 aa14.57□□□□□ -0.08
SIRPA-202ENST00000358771 PIGVQ9NUD9 493 aa14.57□□□□□ -0.08
SIRPA-202ENST00000358771 BCLAF3A2AJT9 711 aaKnown RBP14.57□□□□□ -0.08
SIRPA-202ENST00000358771 NT5C1B-RDH14C9J2C7 533 aa14.57□□□□□ -0.08
SIRPA-202ENST00000358771 ZBTB24O43167 697 aaPredicted RBP14.57□□□□□ -0.08
SIRPA-202ENST00000358771 LUC7L3O95232 432 aaKnown RBP14.57□□□□□ -0.08
SIRPA-202ENST00000358771 ITGA2BP08514 1039 aa14.57□□□□□ -0.08
SIRPA-202ENST00000358771 STX1BP61266 288 aa14.57□□□□□ -0.08
SIRPA-202ENST00000358771 CDK16Q00536 496 aa14.57□□□□□ -0.08
SIRPA-202ENST00000358771 INCA1Q0VD86 236 aa14.57□□□□□ -0.08
SIRPA-202ENST00000358771 XRCC4Q13426 336 aa14.57□□□□□ -0.08
SIRPA-202ENST00000358771 OTOP3Q7RTS5 596 aa14.57□□□□□ -0.08
SIRPA-202ENST00000358771 SCAMP5Q8TAC9 235 aa14.57□□□□□ -0.08
SIRPA-202ENST00000358771 SCG3Q8WXD2 468 aaKnown RBP14.57□□□□□ -0.08
SIRPA-202ENST00000358771 SOCS4Q8WXH5 440 aa14.57□□□□□ -0.08
SIRPA-202ENST00000358771 NDE1Q9NXR1 346 aa14.57□□□□□ -0.08
SIRPA-202ENST00000358771 ANGPTL2Q9UKU9 493 aa14.57□□□□□ -0.08
SIRPA-202ENST00000358771 DERAQ9Y315 318 aa14.57□□□□□ -0.08
SIRPA-202ENST00000358771 TSPAN3O60637 253 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms