RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 H3BRJ5 948 aa15.72■□□□□ 0.11
TPM1-206ENST00000358278 DAPK3O43293 454 aa15.72■□□□□ 0.11
TPM1-206ENST00000358278 TYRP14679 529 aa15.72■□□□□ 0.11
TPM1-206ENST00000358278 CTNNA2P26232 953 aa15.72■□□□□ 0.11
TPM1-206ENST00000358278 EPHB2P29323 1055 aa15.72■□□□□ 0.11
TPM1-206ENST00000358278 ZNF135P52742 658 aaPredicted RBP15.72■□□□□ 0.11
TPM1-206ENST00000358278 GAD2Q05329 585 aa15.72■□□□□ 0.11
TPM1-206ENST00000358278 SEMA3BQ13214 749 aa15.72■□□□□ 0.11
TPM1-206ENST00000358278 PDK2Q15119 407 aa15.72■□□□□ 0.11
TPM1-206ENST00000358278 MANEALQ5VSG8 457 aa15.72■□□□□ 0.11
TPM1-206ENST00000358278 CIR1Q86X95 450 aaPredicted RBP15.72■□□□□ 0.11
TPM1-206ENST00000358278 IGSF8Q969P0 613 aa15.72■□□□□ 0.11
TPM1-206ENST00000358278 NECAB3Q96P71 396 aaPredicted RBP15.72■□□□□ 0.11
TPM1-206ENST00000358278 ZYG11BQ9C0D3 744 aa15.72■□□□□ 0.11
TPM1-206ENST00000358278 PCDH18Q9HCL0 1135 aa15.72■□□□□ 0.11
TPM1-206ENST00000358278 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.72■□□□□ 0.11
TPM1-206ENST00000358278 MARK1Q9P0L2 795 aa15.72■□□□□ 0.11
TPM1-206ENST00000358278 PCDHA3Q9Y5H8 950 aa15.72■□□□□ 0.11
TPM1-206ENST00000358278 ATG2BQ96BY7 2078 aa15.72■□□□□ 0.11
TPM1-206ENST00000358278 MYO18AQ92614 2054 aaKnown RBP15.71■□□□□ 0.11
TPM1-206ENST00000358278 IGLV3-10A0A075B6K4 115 aa15.71■□□□□ 0.11
TPM1-206ENST00000358278 A0A1B0GVM2 712 aa15.71■□□□□ 0.11
TPM1-206ENST00000358278 TCAF2A6NFQ2 919 aa15.71■□□□□ 0.11
TPM1-206ENST00000358278 GFRA2O00451 464 aa15.71■□□□□ 0.11
TPM1-206ENST00000358278 GOT1P17174 413 aa15.71■□□□□ 0.11
TPM1-206ENST00000358278 HOXD9P28356 352 aaPredicted RBP15.71■□□□□ 0.11
TPM1-206ENST00000358278 HTR7P34969 479 aa15.71■□□□□ 0.11
TPM1-206ENST00000358278 FYB2Q5VWT5 728 aa15.71■□□□□ 0.11
TPM1-206ENST00000358278 CCDC50Q8IVM0 306 aa15.71■□□□□ 0.11
TPM1-206ENST00000358278 CCDC117Q8IWD4 279 aaPredicted RBP15.71■□□□□ 0.11
TPM1-206ENST00000358278 KATNAL2Q8IYT4 538 aa15.71■□□□□ 0.11
TPM1-206ENST00000358278 ZNF683Q8IZ20 524 aa15.71■□□□□ 0.11
TPM1-206ENST00000358278 SLC35F6Q8N357 371 aa15.71■□□□□ 0.11
TPM1-206ENST00000358278 UBE2Q2Q8WVN8 375 aa15.71■□□□□ 0.11
TPM1-206ENST00000358278 TRPV5Q9NQA5 729 aa15.71■□□□□ 0.11
TPM1-206ENST00000358278 SLC2A4RGQ9NR83 387 aa15.71■□□□□ 0.11
TPM1-206ENST00000358278 MPP6Q9NZW5 540 aa15.71■□□□□ 0.11
TPM1-206ENST00000358278 PPARGC1AQ9UBK2 798 aaKnown RBP15.71■□□□□ 0.11
TPM1-206ENST00000358278 PI4K2BG5E9Z4 385 aa15.71■□□□□ 0.1
TPM1-206ENST00000358278 HOXC11O43248 304 aaPredicted RBP15.71■□□□□ 0.1
TPM1-206ENST00000358278 PENKP01210 267 aaPredicted RBP15.71■□□□□ 0.1
TPM1-206ENST00000358278 CD48P09326 243 aa15.71■□□□□ 0.1
TPM1-206ENST00000358278 KDELR1P24390 212 aa15.71■□□□□ 0.1
TPM1-206ENST00000358278 IRAK1P51617 712 aa15.71■□□□□ 0.1
TPM1-206ENST00000358278 RWDD2BP57060 319 aa15.71■□□□□ 0.1
TPM1-206ENST00000358278 GNG11P61952 73 aa15.71■□□□□ 0.1
TPM1-206ENST00000358278 CDH18Q13634 790 aa15.71■□□□□ 0.1
TPM1-206ENST00000358278 DPYSL3Q14195 570 aa15.71■□□□□ 0.1
TPM1-206ENST00000358278 C5orf22Q49AR2 442 aa15.71■□□□□ 0.1
TPM1-206ENST00000358278 MPP7Q5T2T1 576 aa15.71■□□□□ 0.1
TPM1-206ENST00000358278 MEI1Q5TIA1 1274 aa15.71■□□□□ 0.1
TPM1-206ENST00000358278 RFX8Q6ZV50 586 aa15.71■□□□□ 0.1
TPM1-206ENST00000358278 TFAP2DQ7Z6R9 452 aa15.71■□□□□ 0.1
TPM1-206ENST00000358278 CARNMT1Q8N4J0 409 aa15.71■□□□□ 0.1
TPM1-206ENST00000358278 RAPGEF5Q92565 580 aa15.71■□□□□ 0.1
TPM1-206ENST00000358278 HES6Q96HZ4 224 aa15.71■□□□□ 0.1
TPM1-206ENST00000358278 XPO6Q96QU8 1125 aaKnown RBP15.71■□□□□ 0.1
TPM1-206ENST00000358278 CATSPERBQ9H7T0 1116 aa15.71■□□□□ 0.1
TPM1-206ENST00000358278 CWC15Q9P013 229 aaKnown RBP15.71■□□□□ 0.1
TPM1-206ENST00000358278 RCOR3Q9P2K3 495 aaPredicted RBP15.71■□□□□ 0.1
TPM1-206ENST00000358278 NYNRINQ9P2P1 1898 aaKnown RBP15.7■□□□□ 0.1
TPM1-206ENST00000358278 H0Y626 953 aa15.7■□□□□ 0.1
TPM1-206ENST00000358278 FGF10O15520 208 aaPredicted RBP15.7■□□□□ 0.1
TPM1-206ENST00000358278 CLDN11O75508 207 aa15.7■□□□□ 0.1
TPM1-206ENST00000358278 CNTN5O94779 1100 aa15.7■□□□□ 0.1
TPM1-206ENST00000358278 ZRANB2O95218 330 aaKnown RBP eCLIP15.7■□□□□ 0.1
TPM1-206ENST00000358278 LUC7L3O95232 432 aaKnown RBP15.7■□□□□ 0.1
TPM1-206ENST00000358278 GJA4P35212 333 aa15.7■□□□□ 0.1
TPM1-206ENST00000358278 CDH4P55283 916 aa15.7■□□□□ 0.1
TPM1-206ENST00000358278 RPS6KA1Q15418 735 aa15.7■□□□□ 0.1
TPM1-206ENST00000358278 ALFQ53S48 1182 aa15.7■□□□□ 0.1
TPM1-206ENST00000358278 CHST9Q7L1S5 443 aa15.7■□□□□ 0.1
TPM1-206ENST00000358278 MFN1Q8IWA4 741 aa15.7■□□□□ 0.1
TPM1-206ENST00000358278 NAT16Q8N8M0 369 aa15.7■□□□□ 0.1
TPM1-206ENST00000358278 RNF25Q96BH1 459 aaPredicted RBP15.7■□□□□ 0.1
TPM1-206ENST00000358278 RBM41Q96IZ5 413 aaKnown RBP15.7■□□□□ 0.1
TPM1-206ENST00000358278 CSPG4P5Q96PW8 444 aa15.7■□□□□ 0.1
TPM1-206ENST00000358278 UHRF1Q96T88 793 aaPredicted RBP15.7■□□□□ 0.1
TPM1-206ENST00000358278 ZNF670Q9BS34 389 aa15.7■□□□□ 0.1
TPM1-206ENST00000358278 HEBP1Q9NRV9 189 aa15.7■□□□□ 0.1
TPM1-206ENST00000358278 MUTYHQ9UIF7 546 aa15.7■□□□□ 0.1
TPM1-206ENST00000358278 NEU3Q9UQ49 428 aa15.7■□□□□ 0.1
TPM1-206ENST00000358278 JRKLQ9Y4A0 524 aa15.7■□□□□ 0.1
TPM1-206ENST00000358278 DRGXA6NNA5 263 aa15.69■□□□□ 0.1
TPM1-206ENST00000358278 ENC1O14682 589 aa15.69■□□□□ 0.1
TPM1-206ENST00000358278 CACNG3O60359 315 aa15.69■□□□□ 0.1
TPM1-206ENST00000358278 HOXC13P31276 330 aa15.69■□□□□ 0.1
TPM1-206ENST00000358278 SOX9P48436 509 aa15.69■□□□□ 0.1
TPM1-206ENST00000358278 HCAR3P49019 387 aa15.69■□□□□ 0.1
TPM1-206ENST00000358278 ARSEP51690 589 aa15.69■□□□□ 0.1
TPM1-206ENST00000358278 AMPD2Q01433 879 aa15.69■□□□□ 0.1
TPM1-206ENST00000358278 MMRN1Q13201 1228 aa15.69■□□□□ 0.1
TPM1-206ENST00000358278 EXD1Q8NHP7 514 aa15.69■□□□□ 0.1
TPM1-206ENST00000358278 FAM71BQ8TC56 605 aa15.69■□□□□ 0.1
TPM1-206ENST00000358278 TSC1Q92574 1164 aa15.69■□□□□ 0.1
TPM1-206ENST00000358278 ALG3Q92685 438 aa15.69■□□□□ 0.1
TPM1-206ENST00000358278 P2RY11Q96G91 374 aa15.69■□□□□ 0.1
TPM1-206ENST00000358278 CD320Q9NPF0 282 aa15.69■□□□□ 0.1
TPM1-206ENST00000358278 DNAJC17Q9NVM6 304 aaKnown RBP15.69■□□□□ 0.1
TPM1-206ENST00000358278 PIAS3Q9Y6X2 628 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms