RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 TYRP14679 529 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 KDELR1P24390 212 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 IL4RP24394 825 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 HOXD9P28356 352 aaPredicted RBP15.33■□□□□ 0.04
CCNE1-202ENST00000357943 EPHB2P29323 1055 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 SOX9P48436 509 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 DPYSL3Q14195 570 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 KRT81Q14533 505 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 GAB4Q2WGN9 574 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 ITPRIPL2Q3MIP1 535 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 RABGAP1LQ5R372 815 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 RWDD4Q6NW29 188 aaKnown RBP15.33■□□□□ 0.04
CCNE1-202ENST00000357943 CPA6Q8N4T0 437 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 NAT16Q8N8M0 369 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 FAM71BQ8TC56 605 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 CSGALNACT1Q8TDX6 532 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 ALG3Q92685 438 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 RNF25Q96BH1 459 aaPredicted RBP15.33■□□□□ 0.04
CCNE1-202ENST00000357943 TBC1D31Q96DN5 1066 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 CHFRQ96EP1 664 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 DDX56Q9NY93 547 aaKnown RBP15.33■□□□□ 0.04
CCNE1-202ENST00000357943 PPARGC1AQ9UBK2 798 aaKnown RBP15.33■□□□□ 0.04
CCNE1-202ENST00000357943 CLEC4EQ9ULY5 219 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.33■□□□□ 0.04
CCNE1-202ENST00000357943 LRRD1A4D1F6 860 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 C3orf70A6NLC5 250 aaPredicted RBP15.32■□□□□ 0.04
CCNE1-202ENST00000357943 EEF2KO00418 725 aaKnown RBP15.32■□□□□ 0.04
CCNE1-202ENST00000357943 ENC1O14682 589 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 HOXC11O43248 304 aaPredicted RBP15.32■□□□□ 0.04
CCNE1-202ENST00000357943 HOXC13P31276 330 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 GJA4P35212 333 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 TPI1P60174 286 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 GAD2Q05329 585 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 MMRN1Q13201 1228 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 MPP7Q5T2T1 576 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 RFX8Q6ZV50 586 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 ANKS1BQ7Z6G8 1248 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 TFAP2DQ7Z6R9 452 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 C12orf40Q86WS4 652 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 KATNAL2Q8IYT4 538 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 HJURPQ8NCD3 748 aaPredicted RBP15.32■□□□□ 0.04
CCNE1-202ENST00000357943 TSC1Q92574 1164 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 CSPG4P5Q96PW8 444 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 CALN1Q9BXU9 219 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 ZYG11BQ9C0D3 744 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 TRPV5Q9NQA5 729 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 SLC2A4RGQ9NR83 387 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 HEBP1Q9NRV9 189 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 MUTYHQ9UIF7 546 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 TYW5A2RUC4 315 aaKnown RBP15.32■□□□□ 0.04
CCNE1-202ENST00000357943 MIF4GDA9UHW6 222 aaKnown RBP15.32■□□□□ 0.04
CCNE1-202ENST00000357943 ARL4AP40617 200 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 RWDD2BP57060 319 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 GNG11P61952 73 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 NR1H3Q13133 447 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 PDK2Q15119 407 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 LLGL1Q15334 1064 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 NAIF1Q69YI7 327 aaPredicted RBP15.32■□□□□ 0.04
CCNE1-202ENST00000357943 MFSD7Q6UXD7 560 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 NLRP14Q86W24 1093 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 UBL4BQ8N7F7 174 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 WFDC5Q8TCV5 224 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 DNASE1L2Q92874 299 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 TLR10Q9BXR5 811 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 NDFIP2Q9NV92 336 aa15.32■□□□□ 0.04
CCNE1-202ENST00000357943 A0A1B0GVM2 712 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 TCAF2A6NFQ2 919 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 TRIM24O15164 1050 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 ZRANB2O95218 330 aaKnown RBP eCLIP15.31■□□□□ 0.04
CCNE1-202ENST00000357943 SLC6A11P48066 632 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 CDH4P55283 916 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 PFKPQ01813 784 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 DPYSQ14117 519 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 RPS6KA1Q15418 735 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 ODF2Q5BJF6 829 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 FSCBQ5H9T9 825 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 TTC39BQ5VTQ0 682 aaPredicted RBP15.31■□□□□ 0.04
CCNE1-202ENST00000357943 DCAF12L1Q5VU92 463 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 RNF43Q68DV7 783 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 AADACL2Q6P093 401 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 MAP7D3Q8IWC1 876 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 ETFBKMTQ8IXQ9 262 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 CARNMT1Q8N4J0 409 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 EXD1Q8NHP7 514 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 WDR24Q96S15 920 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 UHRF1Q96T88 793 aaPredicted RBP15.31■□□□□ 0.04
CCNE1-202ENST00000357943 PSMB7Q99436 277 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 ZNF670Q9BS34 389 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 ZNF212Q9UDV6 495 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 JRKLQ9Y4A0 524 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 COL4A3Q01955 1670 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 MYOFQ9NZM1 2061 aa15.31■□□□□ 0.04
CCNE1-202ENST00000357943 H3BRJ5 948 aa15.3■□□□□ 0.04
CCNE1-202ENST00000357943 FANCGO15287 622 aa15.3■□□□□ 0.04
CCNE1-202ENST00000357943 DAPK3O43293 454 aa15.3■□□□□ 0.04
CCNE1-202ENST00000357943 CACNG3O60359 315 aa15.3■□□□□ 0.04
CCNE1-202ENST00000357943 CLDN11O75508 207 aa15.3■□□□□ 0.04
CCNE1-202ENST00000357943 LUC7L3O95232 432 aaKnown RBP15.3■□□□□ 0.04
CCNE1-202ENST00000357943 PYGMP11217 842 aa15.3■□□□□ 0.04
CCNE1-202ENST00000357943 RHOQP17081 205 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms