RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 TBL3Q12788 808 aaKnown RBP18.16■□□□□ 0.5
RTN4-204ENST00000357732 VGLL4Q14135 290 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 ANKRD20A4Q4UJ75 823 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 DEFB107AQ8IZN7 70 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 KCTD15Q96SI1 283 aaPredicted RBP18.16■□□□□ 0.5
RTN4-204ENST00000357732 SERPINI1Q99574 410 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 DDX50Q9BQ39 737 aaKnown RBP18.16■□□□□ 0.5
RTN4-204ENST00000357732 CDH19Q9H159 772 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 PNPOQ9NVS9 261 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 ERAP1Q9NZ08 941 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 IGSF9Q9P2J2 1179 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 PLXNA1Q9UIW2 1896 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 ADAMTS6Q9UKP5 1117 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 PDLIM1O00151 329 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 USP2O75604 605 aaPredicted RBP18.16■□□□□ 0.5
RTN4-204ENST00000357732 COX4I1P13073 169 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 VAV1P15498 845 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 ADORA2AP29274 412 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 ADSLP30566 484 aaPredicted RBP18.16■□□□□ 0.5
RTN4-204ENST00000357732 SPRP35270 261 aaPredicted RBP18.16■□□□□ 0.5
RTN4-204ENST00000357732 ITGA9Q13797 1035 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 SFT2D3Q587I9 215 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 OGFRL1Q5TC84 451 aaPredicted RBP18.16■□□□□ 0.5
RTN4-204ENST00000357732 RNF111Q6ZNA4 994 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 POU5F2Q8N7G0 328 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 ICA1LQ8NDH6 482 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 CERS2Q96G23 380 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 CNDP1Q96KN2 507 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 DNAI2Q9GZS0 605 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 Q9H521 79 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 TMEM216Q9P0N5 145 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 VPS28Q9UK41 221 aa18.16■□□□□ 0.5
RTN4-204ENST00000357732 SOCS7O14512 581 aa18.15■□□□□ 0.5
RTN4-204ENST00000357732 CHN2P52757 468 aa18.15■□□□□ 0.5
RTN4-204ENST00000357732 PRKAA2P54646 552 aa18.15■□□□□ 0.5
RTN4-204ENST00000357732 MSLNQ13421 630 aaPredicted RBP18.15■□□□□ 0.5
RTN4-204ENST00000357732 PDK1Q15118 436 aa18.15■□□□□ 0.5
RTN4-204ENST00000357732 MMEL1Q495T6 779 aa18.15■□□□□ 0.5
RTN4-204ENST00000357732 SETD3Q86TU7 594 aaPredicted RBP18.15■□□□□ 0.5
RTN4-204ENST00000357732 LINC01465Q8N7H1 131 aa18.15■□□□□ 0.5
RTN4-204ENST00000357732 CATSPER1Q8NEC5 780 aa18.15■□□□□ 0.5
RTN4-204ENST00000357732 COPS5Q92905 334 aa18.15■□□□□ 0.5
RTN4-204ENST00000357732 PLEKHA5Q9HAU0 1116 aa18.15■□□□□ 0.5
RTN4-204ENST00000357732 PSMD13Q9UNM6 376 aa18.15■□□□□ 0.5
RTN4-204ENST00000357732 SLC25A27O95847 323 aa18.15■□□□□ 0.5
RTN4-204ENST00000357732 APOA4P06727 396 aa18.15■□□□□ 0.5
RTN4-204ENST00000357732 THRAP10827 490 aa18.15■□□□□ 0.5
RTN4-204ENST00000357732 ARF4P18085 180 aaPredicted RBP18.15■□□□□ 0.5
RTN4-204ENST00000357732 MGAT1P26572 445 aa18.15■□□□□ 0.5
RTN4-204ENST00000357732 SERPINB6P35237 376 aa18.15■□□□□ 0.5
RTN4-204ENST00000357732 BCAT1P54687 386 aa18.15■□□□□ 0.5
RTN4-204ENST00000357732 BST2Q10589 180 aaKnown RBP18.15■□□□□ 0.5
RTN4-204ENST00000357732 ZFP1Q6P2D0 407 aa18.15■□□□□ 0.5
RTN4-204ENST00000357732 MMP19Q99542 508 aa18.15■□□□□ 0.5
RTN4-204ENST00000357732 RBBP8Q99708 897 aa18.15■□□□□ 0.5
RTN4-204ENST00000357732 STK39Q9UEW8 545 aa18.15■□□□□ 0.5
RTN4-204ENST00000357732 DENRO43583 198 aaKnown RBP18.14■□□□□ 0.49
RTN4-204ENST00000357732 RAG1P15918 1043 aa18.14■□□□□ 0.49
RTN4-204ENST00000357732 NCF2P19878 526 aaPredicted RBP18.14■□□□□ 0.49
RTN4-204ENST00000357732 GRM5P41594 1212 aa18.14■□□□□ 0.49
RTN4-204ENST00000357732 RPS6KA3P51812 740 aa18.14■□□□□ 0.49
RTN4-204ENST00000357732 AQP4P55087 323 aa18.14■□□□□ 0.49
RTN4-204ENST00000357732 KLF10Q13118 480 aa18.14■□□□□ 0.49
RTN4-204ENST00000357732 BIRC2Q13490 618 aa18.14■□□□□ 0.49
RTN4-204ENST00000357732 TRIP10Q15642 601 aa18.14■□□□□ 0.49
RTN4-204ENST00000357732 C16orf89Q6UX73 402 aa18.14■□□□□ 0.49
RTN4-204ENST00000357732 GADL1Q6ZQY3 521 aa18.14■□□□□ 0.49
RTN4-204ENST00000357732 FRMD7Q6ZUT3 714 aa18.14■□□□□ 0.49
RTN4-204ENST00000357732 LCA5Q86VQ0 697 aa18.14■□□□□ 0.49
RTN4-204ENST00000357732 MARVELD2Q8N4S9 558 aa18.14■□□□□ 0.49
RTN4-204ENST00000357732 LRRC52Q8N7C0 313 aa18.14■□□□□ 0.49
RTN4-204ENST00000357732 PPP1R16BQ96T49 567 aa18.14■□□□□ 0.49
RTN4-204ENST00000357732 LRRC40Q9H9A6 602 aa18.14■□□□□ 0.49
RTN4-204ENST00000357732 SNX15Q9NRS6 342 aa18.14■□□□□ 0.49
RTN4-204ENST00000357732 COL1A2P08123 1366 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 RNF103O00237 685 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 AP1G2O75843 785 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 PEX2P28328 305 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 HADHAP40939 763 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 LIMK2P53671 638 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 PDK3Q15120 406 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 ACOT1Q86TX2 421 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 UNC5BQ8IZJ1 945 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 RDH11Q8TC12 318 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 COG4Q9H9E3 785 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.13■□□□□ 0.49
RTN4-204ENST00000357732 RAD54BQ9Y620 910 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 RALGAPA2Q2PPJ7 1873 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 PTPRFP10586 1907 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 A0A087WZ62 844 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 H3BNX3 289 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 GABBR2O75899 941 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 PDE5AO76074 875 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 HSPA4LO95757 839 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 GLDCP23378 1020 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 SESN2P58004 480 aaPredicted RBP18.13■□□□□ 0.49
RTN4-204ENST00000357732 LSAMPQ13449 338 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 SLC5A9Q2M3M2 681 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 FBXO16Q8IX29 292 aaPredicted RBP18.13■□□□□ 0.49
RTN4-204ENST00000357732 ANKRD52Q8NB46 1076 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms