RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 OCM2P0CE71 109 aa15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 OCMP0CE72 109 aaPredicted RBP15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 ODC1P11926 461 aa15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 PSMB9P28065 219 aa15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 ZNF143P52747 638 aaPredicted RBP15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 CRADDP78560 199 aa15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 BLMHQ13867 455 aa15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 TDRD10Q5VZ19 366 aaKnown RBP15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 CROCCP3Q8IVE0 287 aa15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 RMND5AQ9H871 391 aa15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 PRR5-ARHGAP8B1AHC4 643 aa15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 PRIM2P49643 509 aa15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 ARHGAP8P85298 464 aa15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 DDX39BQ13838 428 aaKnown RBP15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 ANKS6Q68DC2 871 aa15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 ZNF572Q7Z3I7 529 aaPredicted RBP15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 ATG16L2Q8NAA4 619 aa15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 ZNF483Q8TF39 744 aaPredicted RBP15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 PORCNQ9H237 461 aa15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 STN1Q9H668 368 aaKnown RBP15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 MID1IP1Q9NPA3 183 aa15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 CDV3Q9UKY7 258 aaKnown RBP15.93■□□□□ 0.14
TRAPPC11-202ENST00000357207 LACTBL1A8MY62 500 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 HDAC3O15379 428 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 ZNF682O95780 498 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 HARS2P49590 506 aaKnown RBP15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 UNC5AQ6ZN44 842 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 C12orf56Q8IXR9 622 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 CERS2Q96G23 380 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 VAT1Q99536 393 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 SPASTQ9UBP0 616 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 SYNPO2Q9UMS6 1093 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 COG5Q9UP83 839 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 GRIN2DO15399 1336 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 LRPAP1P30533 357 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 CCR1P32246 355 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 CCT8P50990 548 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 MARC1Q5VT66 337 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 SCARA3Q6AZY7 606 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 PALB2Q86YC2 1186 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 GSTCDQ8NEC7 633 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 L3MBTL3Q96JM7 780 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 MBOAT7Q96N66 472 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 MECRQ9BV79 373 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 NMUR2Q9GZQ4 415 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 GIMAP4Q9NUV9 329 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 INSRRP14616 1297 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 PPP3CCP48454 512 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 SNX17Q15036 470 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 PIGWQ7Z7B1 504 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 MIER2Q8N344 545 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 GPRC5AQ8NFJ5 357 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 SPOCK2Q92563 424 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 DENND2DQ9H6A0 471 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 MAN1C1Q9NR34 630 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 RRN3Q9NYV6 651 aa15.92■□□□□ 0.14
TRAPPC11-202ENST00000357207 LINC00854A0A1B0GVQ3 168 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 SOX6P35712 828 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 ACVR2BQ13705 512 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 FBXO16Q8IX29 292 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 EDEM1Q92611 657 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 C6orf203Q9P0P8 240 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 TRUB2O95900 331 aaKnown RBP15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 ETS2P15036 469 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 FGFR3P22607 806 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 HOMEZQ8IX15 550 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 FAM126BQ8IXS8 530 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 EFCAB3Q8N7B9 438 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 LSM7Q9UK45 103 aaKnown RBP15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 PLA2G4CQ9UP65 541 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 TMEM191CA6NGB0 347 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 CRTAMO95727 393 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 CYBBP04839 570 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 SNAPC2Q13487 334 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 MFSD14CQ5VZR4 134 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 ELMOD1Q8N336 334 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 FBXO39Q8N4B4 442 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 OR52K1Q8NGK4 314 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 RORBQ92753 470 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 ATXN3LQ9H3M9 355 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 MPP6Q9NZW5 540 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 PCDHB8Q9UN66 801 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 C15orf38-AP3S2A0A0A6YYH1 394 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 PTGES3LE9PB15 166 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 CNOT3O75175 753 aaKnown RBP15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 EIF2B2P49770 351 aaKnown RBP15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 ARHGEF7Q14155 803 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 LLGL2Q6P1M3 1020 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 LRP10Q7Z4F1 713 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 ARPINQ7Z6K5 226 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 VSIG10LQ86VR7 867 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 PSTKQ8IV42 348 aaKnown RBP15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 SNRNP25Q9BV90 132 aaKnown RBP15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 POMKQ9H5K3 350 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 TMEM134Q9H6X4 195 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 PDGFCQ9NRA1 345 aa15.91■□□□□ 0.14
TRAPPC11-202ENST00000357207 ITGB5P18084 799 aa15.9■□□□□ 0.14
TRAPPC11-202ENST00000357207 PSMB4P28070 264 aa15.9■□□□□ 0.14
TRAPPC11-202ENST00000357207 OR1G1P47890 313 aa15.9■□□□□ 0.14
TRAPPC11-202ENST00000357207 LHX1P48742 406 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms