RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.02■□□□□ 0.16
TRIM13-201ENST00000356017 GRID2IPA4D2P6 1211 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 GOLGA6L9A6NEM1 432 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 PI4K2BG5E9Z4 385 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 FAM72CH0Y354 149 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 H0Y626 953 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 PSTPIP1O43586 416 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 TULP3O75386 442 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 EPHB2P29323 1055 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 ARL4AP40617 200 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 OPRD1P41143 372 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 HCAR3P49019 387 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 DGKGP49619 791 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 SGSHP51688 502 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 OXCT1P55809 520 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 TAS2R40P59535 323 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 ZNF177Q13360 481 aaPredicted RBP16.02■□□□□ 0.16
TRIM13-201ENST00000356017 CDH18Q13634 790 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 PDK2Q15119 407 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 ODF2Q5BJF6 829 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 PPP6R3Q5H9R7 873 aaPredicted RBP16.02■□□□□ 0.16
TRIM13-201ENST00000356017 ZFYVE27Q5T4F4 411 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 FAM72AQ5TYM5 149 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 FAM72DQ6L9T8 149 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 RWDD4Q6NW29 188 aaKnown RBP16.02■□□□□ 0.16
TRIM13-201ENST00000356017 FAM72BQ86X60 149 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 FIBINQ8TAL6 211 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 FAM3CQ92520 227 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 MYEOVQ96EZ4 313 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 ALS2CR12Q96Q35 445 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 PNKPQ96T60 521 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 NELL2Q99435 816 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 CATSPERBQ9H7T0 1116 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 DNAJC17Q9NVM6 304 aaKnown RBP16.02■□□□□ 0.16
TRIM13-201ENST00000356017 GPATCH2LQ9NWQ4 482 aa16.02■□□□□ 0.16
TRIM13-201ENST00000356017 DDX56Q9NY93 547 aaKnown RBP16.02■□□□□ 0.16
TRIM13-201ENST00000356017 KRBA1A5PL33 1030 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 FGF10O15520 208 aaPredicted RBP16.01■□□□□ 0.15
TRIM13-201ENST00000356017 PALMO75781 387 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 LUC7L3O95232 432 aaKnown RBP16.01■□□□□ 0.15
TRIM13-201ENST00000356017 RHOQP17081 205 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 HOXC13P31276 330 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 GJC1P36383 396 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 TPI1P60174 286 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 GRSF1Q12849 480 aaKnown RBP eCLIP16.01■□□□□ 0.15
TRIM13-201ENST00000356017 KRT81Q14533 505 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 CA9Q16790 459 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 TXNRD3NBQ6F5E7 133 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 TRIM67Q6ZTA4 783 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 PEX26Q7Z412 305 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 CPNE8Q86YQ8 564 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 CCAR2Q8N163 923 aaKnown RBP16.01■□□□□ 0.15
TRIM13-201ENST00000356017 CARNMT1Q8N4J0 409 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 KCTD6Q8NC69 237 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 CHFRQ96EP1 664 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 MAGEB5Q9BZ81 275 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 GOLPH3Q9H4A6 298 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 RCOR3Q9P2K3 495 aaPredicted RBP16.01■□□□□ 0.15
TRIM13-201ENST00000356017 AMFRQ9UKV5 643 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 SLC27A6Q9Y2P4 619 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 HYOU1Q9Y4L1 999 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.01■□□□□ 0.15
TRIM13-201ENST00000356017 KANSL1LA0AUZ9 987 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 CCDC66A2RUB6 948 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 H3BRJ5 948 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 TNFRSF10AO00220 468 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 EEF2KO00418 725 aaKnown RBP16.01■□□□□ 0.15
TRIM13-201ENST00000356017 DAPK3O43293 454 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 DRD1P21728 446 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 GRIA2P42262 883 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 GALK1P51570 392 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 CDH6P55285 790 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 HS1BP3Q53T59 392 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 TMEM196Q5HYL7 178 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 IER5LQ5T953 404 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 GRAMD4Q6IC98 578 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 TXNDC11Q6PKC3 985 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 SETD3Q86TU7 594 aaPredicted RBP16.01■□□□□ 0.15
TRIM13-201ENST00000356017 C12orf40Q86WS4 652 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 TRIM58Q8NG06 486 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 FAM71BQ8TC56 605 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 P2RY11Q96G91 374 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 KCTD15Q96SI1 283 aaPredicted RBP16.01■□□□□ 0.15
TRIM13-201ENST00000356017 ARHGEF4Q9NR80 690 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 MPP6Q9NZW5 540 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 KIAA1522Q9P206 1035 aaPredicted RBP16.01■□□□□ 0.15
TRIM13-201ENST00000356017 TBC1D30Q9Y2I9 924 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 CAPN6Q9Y6Q1 641 aa16.01■□□□□ 0.15
TRIM13-201ENST00000356017 A0A0A0MRY4 1105 aa16■□□□□ 0.15
TRIM13-201ENST00000356017 MIF4GDA9UHW6 222 aaKnown RBP16■□□□□ 0.15
TRIM13-201ENST00000356017 APODP05090 189 aa16■□□□□ 0.15
TRIM13-201ENST00000356017 CISD3P0C7P0 127 aa16■□□□□ 0.15
TRIM13-201ENST00000356017 TNNT1P13805 278 aa16■□□□□ 0.15
TRIM13-201ENST00000356017 OR1E1P30953 314 aa16■□□□□ 0.15
TRIM13-201ENST00000356017 SLC6A11P48066 632 aa16■□□□□ 0.15
TRIM13-201ENST00000356017 SLC12A1Q13621 1099 aa16■□□□□ 0.15
TRIM13-201ENST00000356017 ATP13A4Q4VNC1 1196 aa16■□□□□ 0.15
TRIM13-201ENST00000356017 ALFQ53S48 1182 aa16■□□□□ 0.15
TRIM13-201ENST00000356017 ARTNQ5T4W7 220 aa16■□□□□ 0.15
TRIM13-201ENST00000356017 C6orf118Q5T5N4 469 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms