RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 CTU1Q7Z7A3 348 aaKnown RBP18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 RASSF3Q86WH2 238 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 FAM72BQ86X60 149 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 RNF169Q8NCN4 708 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 RAB3IL1Q8TBN0 382 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 APOL2Q9BQE5 337 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 RNF39Q9H2S5 420 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 COPG2Q9UBF2 871 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 MORF4L1Q9UBU8 362 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 GLRA3O75311 464 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 SERPINE1P05121 402 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 SETSIPP0DME0 302 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 DESP17661 470 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 AP2B1P63010 937 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 IRF9Q00978 393 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 LAMC2Q13753 1193 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 TTLL12Q14166 644 aaPredicted RBP18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 HIC1Q14526 733 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 C6orf163Q5TEZ5 329 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 OTUD1Q5VV17 481 aaPredicted RBP18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 SLC26A7Q8TE54 656 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 IFT43Q96FT9 208 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 ECSITQ9BQ95 431 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 DCXO43602 365 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 RALBP11234 206 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 ACAT1P24752 427 aaKnown RBP18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 BAG6P46379 1132 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 ADIGQ0VDE8 80 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 CDC16Q13042 620 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 GRIK4Q16099 956 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 TCHHL1Q5QJ38 904 aaPredicted RBP18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 C4orf22Q6V702 233 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 HFE2Q6ZVN8 426 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 PIGZQ86VD9 579 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 HPS6Q86YV9 775 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 SPNS2Q8IVW8 549 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 DCLK2Q8N568 766 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 NLGN2Q8NFZ4 835 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 RNF139Q8WU17 664 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 CDKL2Q92772 493 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 TUBGCP5Q96RT8 1024 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 VCXQ9H320 206 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 ANLNQ9NQW6 1124 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 CACNG4Q9UBN1 327 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 LOC285556D6RIA3 1793 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 WDR90Q96KV7 1748 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 E9PBE3 544 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 BUD23O43709 281 aaKnown RBP18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 KLHL41O60662 606 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 PGAM1P18669 254 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 CCR10P46092 362 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 ARHGAP17Q68EM7 881 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 FRMD7Q6ZUT3 714 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 CYS1Q717R9 158 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 MAPK15Q8TD08 544 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 SNX27Q96L92 541 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 OSMRQ99650 979 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 GCOM2Q9BZD3 368 aaPredicted RBP18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 EBF3Q9H4W6 596 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 SNX15Q9NRS6 342 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 CPSF2Q9P2I0 782 aaKnown RBP18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 DCDC2Q9UHG0 476 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 ADAMTS6Q9UKP5 1117 aa18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 G3BP2Q9UN86 482 aaKnown RBP18.56■□□□□ 0.56
PTP4A3-202ENST00000349124 PTPRFP10586 1907 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 ZBTB14O43829 449 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 RECQL4O94761 1208 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 FDFT1P37268 417 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 COPAP53621 1224 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 CCNIQ14094 377 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 PDPK2PQ6A1A2 396 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 CATSPER4Q7RTX7 472 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 TTC39CQ8N584 583 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 ZNF781Q8N8C0 355 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 C1orf21Q9H246 121 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 S100A14Q9HCY8 104 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 BPTFQ12830 3046 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 I6L893 689 aaPredicted RBP18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 PPP1R12AO14974 1030 aaPredicted RBP18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 LYNP07948 512 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 CPA3P15088 417 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 CNTFP26441 200 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 MATKP42679 507 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 BCAT1P54687 386 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 ABCE1P61221 599 aaKnown RBP18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 EFHC1Q5JVL4 640 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 ERO1BQ86YB8 467 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 ZDHHC17Q8IUH5 632 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 DEFB107AQ8IZN7 70 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 ATP2A3Q93084 1043 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 MFSD3Q96ES6 412 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 TXNDC16Q9P2K2 825 aa18.55■□□□□ 0.56
PTP4A3-202ENST00000349124 MAGEA13PA6NCF6 341 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 ZNF487B1APH4 448 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 RNASEH1O60930 286 aaKnown RBP18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 TPH1P17752 444 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 DSG1Q02413 1049 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 SOX4Q06945 474 aaPredicted RBP18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 CDK18Q07002 472 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 SLC9B1Q4ZJI4 515 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms