RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 PDE1CQ14123 709 aaPredicted RBP15.86■□□□□ 0.13
UPF3B-202ENST00000345865 GPR162Q16538 588 aa15.86■□□□□ 0.13
UPF3B-202ENST00000345865 EDEM1Q92611 657 aa15.86■□□□□ 0.13
UPF3B-202ENST00000345865 SLC9A7Q96T83 725 aa15.86■□□□□ 0.13
UPF3B-202ENST00000345865 FBXW11Q9UKB1 542 aa15.86■□□□□ 0.13
UPF3B-202ENST00000345865 ARL5CA6NH57 179 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 CASTOR2A6NHX0 329 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 C9IYK1 514 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 FCHO1O14526 889 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 CAPN15O75808 1086 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 STK10O94804 968 aaKnown RBP15.85■□□□□ 0.13
UPF3B-202ENST00000345865 CHRNA1P02708 482 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 THP07101 528 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 FAM163BP0C2L3 166 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 C6orf222P0C671 652 aaPredicted RBP15.85■□□□□ 0.13
UPF3B-202ENST00000345865 ERVK-10P10266 1014 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 SCNN1GP51170 649 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 GJA9P57773 515 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 SCAPQ12770 1279 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 TAF1CQ15572 869 aaPredicted RBP15.85■□□□□ 0.13
UPF3B-202ENST00000345865 RFWD3Q6PCD5 774 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 AGMOQ6ZNB7 445 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 OR52K1Q8NGK4 314 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 NSMCE1Q8WV22 266 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 NTAN1Q96AB6 310 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 RTP3Q9BQQ7 232 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 DENND2DQ9H6A0 471 aaPredicted RBP15.85■□□□□ 0.13
UPF3B-202ENST00000345865 DDIT4Q9NX09 232 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 C15orf41Q9Y2V0 281 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 PRKCGP05129 697 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 RPSAP08865 295 aaKnown RBP15.85■□□□□ 0.13
UPF3B-202ENST00000345865 LHX1P48742 406 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 ATG16L1Q676U5 607 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 GDF6Q6KF10 455 aaPredicted RBP15.85■□□□□ 0.13
UPF3B-202ENST00000345865 TAF2Q6P1X5 1199 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 ATG14Q6ZNE5 492 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.85■□□□□ 0.13
UPF3B-202ENST00000345865 TTC8Q8TAM2 541 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 NSL1Q96IY1 281 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 CNGB3Q9NQW8 809 aa15.85■□□□□ 0.13
UPF3B-202ENST00000345865 NOP53Q9NZM5 478 aaKnown RBP15.85■□□□□ 0.13
UPF3B-202ENST00000345865 DIAPH2O60879 1101 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 ENTPD5O75356 428 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 FBXO21O94952 628 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 LTFP02788 710 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 ITGA2BP08514 1039 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 CNTFP26441 200 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 CTGFP29279 349 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 CD68P34810 354 aaPredicted RBP15.84■□□□□ 0.13
UPF3B-202ENST00000345865 TPI1P60174 286 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 IFRD2Q12894 506 aaPredicted RBP15.84■□□□□ 0.13
UPF3B-202ENST00000345865 TIGD5Q53EQ6 642 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 PPM1JQ5JR12 505 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 C17orf99Q6UX52 265 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 CXCL17Q6UXB2 119 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 DSTYKQ6XUX3 929 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 RINLQ6ZS11 566 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 BTBD10Q9BSF8 475 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 COLEC11Q9BWP8 271 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 AGO3Q9H9G7 860 aaKnown RBP15.84■□□□□ 0.13
UPF3B-202ENST00000345865 SLC38A7Q9NVC3 462 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 KCNK4Q9NYG8 393 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 KLHL8Q9P2G9 620 aaPredicted RBP15.84■□□□□ 0.13
UPF3B-202ENST00000345865 SCN10AQ9Y5Y9 1956 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 BIRC5O15392 142 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 ZBTB24O43167 697 aaPredicted RBP15.84■□□□□ 0.13
UPF3B-202ENST00000345865 ITM2AO43736 263 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 MAP2K2P36507 400 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 HUNKP57058 714 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 PAN2Q504Q3 1202 aaKnown RBP15.84■□□□□ 0.13
UPF3B-202ENST00000345865 N4BP2L1Q5TBK1 243 aaPredicted RBP15.84■□□□□ 0.13
UPF3B-202ENST00000345865 TREML1Q86YW5 311 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 TRIM42Q8IWZ5 723 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 TMEM86AQ8N2M4 240 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 PGAP3Q96FM1 320 aaPredicted RBP15.84■□□□□ 0.13
UPF3B-202ENST00000345865 TAS2R1Q9NYW7 299 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 TRPV2Q9Y5S1 764 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 RPS6KL1Q9Y6S9 549 aa15.84■□□□□ 0.13
UPF3B-202ENST00000345865 CCDC22O60826 627 aa15.83■□□□□ 0.12
UPF3B-202ENST00000345865 RGS2P41220 211 aa15.83■□□□□ 0.12
UPF3B-202ENST00000345865 RPL10AP62906 217 aaKnown RBP15.83■□□□□ 0.12
UPF3B-202ENST00000345865 PPIDQ08752 370 aaKnown RBP15.83■□□□□ 0.12
UPF3B-202ENST00000345865 ZBTB17Q13105 803 aa15.83■□□□□ 0.12
UPF3B-202ENST00000345865 FASTKD1Q53R41 847 aaKnown RBP15.83■□□□□ 0.12
UPF3B-202ENST00000345865 GNASQ5JWF2 1037 aa15.83■□□□□ 0.12
UPF3B-202ENST00000345865 ZNF778Q96MU6 729 aa15.83■□□□□ 0.12
UPF3B-202ENST00000345865 SENP6Q9GZR1 1112 aaPredicted RBP15.83■□□□□ 0.12
UPF3B-202ENST00000345865 RNPEPL1Q9HAU8 725 aa15.83■□□□□ 0.12
UPF3B-202ENST00000345865 HBS1LQ9Y450 684 aaKnown RBP15.83■□□□□ 0.12
UPF3B-202ENST00000345865 CAPN14A8MX76 684 aa15.83■□□□□ 0.12
UPF3B-202ENST00000345865 GSC2O15499 205 aa15.83■□□□□ 0.12
UPF3B-202ENST00000345865 LYPLA1O75608 230 aaPredicted RBP15.83■□□□□ 0.12
UPF3B-202ENST00000345865 FGF3P11487 239 aaPredicted RBP15.83■□□□□ 0.12
UPF3B-202ENST00000345865 KCNA4P22459 653 aa15.83■□□□□ 0.12
UPF3B-202ENST00000345865 AIF1P55008 147 aa15.83■□□□□ 0.12
UPF3B-202ENST00000345865 AQP5P55064 265 aa15.83■□□□□ 0.12
UPF3B-202ENST00000345865 KRT72Q14CN4 511 aa15.83■□□□□ 0.12
UPF3B-202ENST00000345865 UPP1Q16831 310 aa15.83■□□□□ 0.12
UPF3B-202ENST00000345865 MBLAC2Q68D91 279 aa15.83■□□□□ 0.12
UPF3B-202ENST00000345865 KCTD11Q693B1 232 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms