RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 PRR23AA6NEV1 266 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 RPL22P35268 128 aaKnown RBP18.45■□□□□ 0.54
SMC4-201ENST00000344722 ZRANB3Q5FWF4 1079 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 RNF219Q5W0B1 726 aaPredicted RBP18.45■□□□□ 0.54
SMC4-201ENST00000344722 AKAP14Q86UN6 197 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 EGFL6Q8IUX8 553 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 AMER2Q8N7J2 671 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 LIMD1Q9UGP4 676 aa18.45■□□□□ 0.54
SMC4-201ENST00000344722 EIF4BP23588 611 aaKnown RBP18.44■□□□□ 0.54
SMC4-201ENST00000344722 RAB15P59190 212 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 DCAF4L1Q3SXM0 396 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 APOL2Q9BQE5 337 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 SPATA16Q9BXB7 569 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 POMKQ9H5K3 350 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 ASTN1O14525 1302 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 ASTN2O75129 1339 aaPredicted RBP18.44■□□□□ 0.54
SMC4-201ENST00000344722 ATP6V1G1O75348 118 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 SLITRK3O94933 977 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 SNRPB2P08579 225 aaKnown RBP18.44■□□□□ 0.54
SMC4-201ENST00000344722 MYL3P08590 195 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 PNPLA4P41247 253 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 IREB2P48200 963 aaKnown RBP18.44■□□□□ 0.54
SMC4-201ENST00000344722 NEK3P51956 506 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 BNIP2Q12982 314 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 ITFG2Q969R8 447 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 PHF21BQ96EK2 531 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 FICDQ9BVA6 458 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 TEX13BQ9BXU2 312 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 NMUR2Q9GZQ4 415 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 RIBC2Q9H4K1 309 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 MAP3K20Q9NYL2 800 aaKnown RBP18.44■□□□□ 0.54
SMC4-201ENST00000344722 SLC17A7Q9P2U7 560 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 A0A087X1B8 175 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 CAPN8A6NHC0 703 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 F9P00740 461 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 KLHL17Q6TDP4 642 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 POLNQ7Z5Q5 900 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 SSU72Q9NP77 194 aaKnown RBP18.44■□□□□ 0.54
SMC4-201ENST00000344722 ABCB10Q9NRK6 738 aa18.44■□□□□ 0.54
SMC4-201ENST00000344722 NEURL4Q96JN8 1562 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 CYP2C9P11712 490 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 RXRGP48443 463 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 MAD2L1Q13257 205 aaPredicted RBP18.43■□□□□ 0.54
SMC4-201ENST00000344722 NFIL3Q16649 462 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 KLHL12Q53G59 568 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 ACTRT2Q8TDY3 377 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 CADM1Q9BY67 442 aaKnown RBP18.43■□□□□ 0.54
SMC4-201ENST00000344722 TRNAU1APQ9NX07 287 aaKnown RBP18.43■□□□□ 0.54
SMC4-201ENST00000344722 ENOPH1Q9UHY7 261 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 DUSP12Q9UNI6 340 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 AP3M1Q9Y2T2 418 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 NCF1BA6NI72 391 aaPredicted RBP18.43■□□□□ 0.54
SMC4-201ENST00000344722 NCF1CA8MVU1 366 aaPredicted RBP18.43■□□□□ 0.54
SMC4-201ENST00000344722 F8VP50 259 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 IFNA14P01570 189 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 NCF1P14598 390 aaPredicted RBP18.43■□□□□ 0.54
SMC4-201ENST00000344722 DNAJB2P25686 324 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 ANKS3Q6ZW76 656 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 ADHFE1Q8IWW8 467 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 SH3KBP1Q96B97 665 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 TTYH3Q9C0H2 523 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 NUAK2Q9H093 628 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 DDIT4Q9NX09 232 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 CENPXA8MT69 81 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 AREL1O15033 823 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 VAPBO95292 243 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 STRIP1Q5VSL9 837 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 EGFLAMQ63HQ2 1017 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 MPZL3Q6UWV2 235 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 EFCAB3Q8N7B9 438 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 PSMA8Q8TAA3 256 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 TAAR1Q96RJ0 339 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 CRNNQ9UBG3 495 aaPredicted RBP18.43■□□□□ 0.54
SMC4-201ENST00000344722 PIN4Q9Y237 131 aaKnown RBP18.43■□□□□ 0.54
SMC4-201ENST00000344722 PARNO95453 639 aaKnown RBP18.43■□□□□ 0.54
SMC4-201ENST00000344722 RBL1P28749 1068 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 CACNB2Q08289 660 aaPredicted RBP18.43■□□□□ 0.54
SMC4-201ENST00000344722 C7orf26Q96N11 449 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 HPS4Q9NQG7 708 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 C8orf4Q9NR00 106 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 LMCD1Q9NZU5 365 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 RAP2CQ9Y3L5 183 aa18.43■□□□□ 0.54
SMC4-201ENST00000344722 ZNF12P17014 697 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 MIPP30301 263 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 SOAT1P35610 550 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 MID1IP1Q9NPA3 183 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 PACSIN3Q9UKS6 424 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 HDAC3O15379 428 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 ZBTB24O43167 697 aaPredicted RBP18.42■□□□□ 0.54
SMC4-201ENST00000344722 ICAM1P05362 532 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 RAP1GAPP47736 663 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 CASP5P51878 434 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 BCAT1P54687 386 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 NAA20P61599 178 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 FAM228AQ86W67 206 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 PDPRQ8NCN5 879 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 RCN3Q96D15 328 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 FOPNLQ96NB1 174 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 CDH22Q9UJ99 828 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 ITGA1P56199 1179 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms