RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 GUCY1A3Q02108 690 aa13.96□□□□□ -0.17
CDC42-202ENST00000344548 SMARCB1Q12824 385 aa13.96□□□□□ -0.17
CDC42-202ENST00000344548 MS4A13Q5J8X5 152 aa13.96□□□□□ -0.17
CDC42-202ENST00000344548 SPRED2Q7Z698 418 aa13.96□□□□□ -0.17
CDC42-202ENST00000344548 ZNF683Q8IZ20 524 aa13.96□□□□□ -0.17
CDC42-202ENST00000344548 MPP5Q8N3R9 675 aa13.96□□□□□ -0.17
CDC42-202ENST00000344548 MRRFQ96E11 262 aaKnown RBP13.96□□□□□ -0.17
CDC42-202ENST00000344548 CYP4F11Q9HBI6 524 aa13.96□□□□□ -0.17
CDC42-202ENST00000344548 IL23AQ9NPF7 189 aa13.96□□□□□ -0.17
CDC42-202ENST00000344548 TLR8Q9NR97 1041 aaKnown RBP13.96□□□□□ -0.17
CDC42-202ENST00000344548 EURLQ9NYK6 297 aa13.96□□□□□ -0.17
CDC42-202ENST00000344548 MARCH2Q9P0N8 246 aa13.96□□□□□ -0.17
CDC42-202ENST00000344548 VANGL2Q9ULK5 521 aa13.96□□□□□ -0.17
CDC42-202ENST00000344548 GOLGA6L7A0A1B0GV03 622 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 PSMB4P28070 264 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 HOXC13P31276 330 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 GARSP41250 739 aaKnown RBP13.95□□□□□ -0.18
CDC42-202ENST00000344548 MAGEA6P43360 314 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 TUBP50607 506 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 RPL10AP62906 217 aaKnown RBP13.95□□□□□ -0.18
CDC42-202ENST00000344548 PPIDQ08752 370 aaKnown RBP13.95□□□□□ -0.18
CDC42-202ENST00000344548 GALNT2Q10471 571 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 ALFQ53S48 1182 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 CMTR2Q8IYT2 770 aaKnown RBP13.95□□□□□ -0.18
CDC42-202ENST00000344548 MDM1Q8TC05 714 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 PYROXD1Q8WU10 500 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 C2orf15Q8WU43 125 aaKnown RBP13.95□□□□□ -0.18
CDC42-202ENST00000344548 TTLL2Q9BWV7 592 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 VPS37BQ9H9H4 285 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 SPG21Q9NZD8 308 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 AFF4Q9UHB7 1163 aaKnown RBP13.95□□□□□ -0.18
CDC42-202ENST00000344548 TEX264Q9Y6I9 313 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 SLC12A8A0AV02 714 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 RGS16O15492 202 aaPredicted RBP13.95□□□□□ -0.18
CDC42-202ENST00000344548 CNTN5O94779 1100 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 CD68P34810 354 aaPredicted RBP13.95□□□□□ -0.18
CDC42-202ENST00000344548 KDM7AQ6ZMT4 941 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 ARHGEF18Q6ZSZ5 1173 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 C3orf62Q6ZUJ4 267 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 EXOC3L1Q86VI1 746 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 PDIK1LQ8N165 341 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 PDCD7Q8N8D1 485 aaKnown RBP13.95□□□□□ -0.18
CDC42-202ENST00000344548 IGSF8Q969P0 613 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 SLC39A8Q9C0K1 460 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 NOL6Q9H6R4 1146 aaKnown RBP13.95□□□□□ -0.18
CDC42-202ENST00000344548 SLC12A6Q9UHW9 1150 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 MYO7AQ13402 2215 aa13.95□□□□□ -0.18
CDC42-202ENST00000344548 LCHNA4D1U4 455 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 PPP1R12AO14974 1030 aaPredicted RBP13.94□□□□□ -0.18
CDC42-202ENST00000344548 ZBTB24O43167 697 aaPredicted RBP13.94□□□□□ -0.18
CDC42-202ENST00000344548 SKOR1P84550 965 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 SEMA5AQ13591 1074 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 SPARCL1Q14515 664 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 C6orf118Q5T5N4 469 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 EMC10Q5UCC4 262 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 BZW1Q7L1Q6 419 aaKnown RBP13.94□□□□□ -0.18
CDC42-202ENST00000344548 PID1Q7Z2X4 250 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 DDX53Q86TM3 631 aaKnown RBP13.94□□□□□ -0.18
CDC42-202ENST00000344548 CIR1Q86X95 450 aaPredicted RBP13.94□□□□□ -0.18
CDC42-202ENST00000344548 ARHGAP18Q8N392 663 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.94□□□□□ -0.18
CDC42-202ENST00000344548 CNTD1Q8N815 330 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 WBP2Q969T9 261 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 RABEP2Q9H5N1 569 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 RABGEF1Q9UJ41 708 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 YIPF1Q9Y548 306 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 CHD9Q3L8U1 2897 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 POC1B-GALNT4F8VUJ3 575 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 DFFAO00273 331 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 TEX28O15482 410 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 LILRB3O75022 631 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 IGLV3-27P01718 113 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 ABHD2P08910 425 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 SYN1P17600 705 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 LAG3P18627 525 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 CRADDP78560 199 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 TRIP4Q15650 581 aaPredicted RBP13.94□□□□□ -0.18
CDC42-202ENST00000344548 RAP1GAP2Q684P5 730 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 NADSYN1Q6IA69 706 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 TFAP2DQ7Z6R9 452 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 HDAC11Q96DB2 347 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 AGAP3Q96P47 875 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 HERC2P3Q9BVR0 1158 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 OXCT2Q9BYC2 517 aaPredicted RBP13.94□□□□□ -0.18
CDC42-202ENST00000344548 UBE2OQ9C0C9 1292 aaKnown RBP13.94□□□□□ -0.18
CDC42-202ENST00000344548 RNF38Q9H0F5 515 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 PRDM16Q9HAZ2 1276 aa13.94□□□□□ -0.18
CDC42-202ENST00000344548 NYNRINQ9P2P1 1898 aaKnown RBP13.94□□□□□ -0.18
CDC42-202ENST00000344548 ZNF840PA6NDX5 716 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 NRG2O14511 850 aaPredicted RBP13.93□□□□□ -0.18
CDC42-202ENST00000344548 USP12O75317 370 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 TCEA3O75764 348 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 FGF18O76093 207 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 C1QAP02745 245 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 MAGEA3P43357 314 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 TUFMP49411 452 aaKnown RBP13.93□□□□□ -0.18
CDC42-202ENST00000344548 FBXL22Q6P050 247 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 PRPF39Q86UA1 669 aaKnown RBP13.93□□□□□ -0.18
CDC42-202ENST00000344548 NLRP14Q86W24 1093 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 FBF1Q8TES7 1133 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms