RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 GP5P40197 560 aa13.14□□□□□ -0.31
DNMT1-201ENST00000340748 DBF4BQ8NFT6 615 aa13.14□□□□□ -0.31
DNMT1-201ENST00000340748 IL31RAQ8NI17 732 aa13.14□□□□□ -0.31
DNMT1-201ENST00000340748 SUSD6Q92537 303 aa13.14□□□□□ -0.31
DNMT1-201ENST00000340748 CLPBQ9H078 707 aa13.14□□□□□ -0.31
DNMT1-201ENST00000340748 DCLRE1BQ9H816 532 aa13.14□□□□□ -0.31
DNMT1-201ENST00000340748 GPAMQ9HCL2 828 aa13.14□□□□□ -0.31
DNMT1-201ENST00000340748 GIT1Q9Y2X7 761 aa13.14□□□□□ -0.31
DNMT1-201ENST00000340748 HES2Q9Y543 173 aa13.14□□□□□ -0.31
DNMT1-201ENST00000340748 ASTN1O14525 1302 aa13.14□□□□□ -0.31
DNMT1-201ENST00000340748 A0A1W2PQ45 241 aaPredicted RBP13.13□□□□□ -0.31
DNMT1-201ENST00000340748 A0A1W2PQY0 241 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 SYNDIG1LA6NDD5 238 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 TRDMT1O14717 391 aaKnown RBP13.13□□□□□ -0.31
DNMT1-201ENST00000340748 ZW10O43264 779 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 TSPAN3O60637 253 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 PECAM1P16284 738 aaPredicted RBP13.13□□□□□ -0.31
DNMT1-201ENST00000340748 LRRC74AQ0VAA2 488 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 ADIGQ0VDE8 80 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 PDPK2PQ6A1A2 396 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 CNKSR3Q6P9H4 555 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 NPAS4Q8IUM7 802 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 PLD3Q8IV08 490 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 CCDC33Q8N5R6 958 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 NT5MQ9NPB1 228 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 FAM105AQ9NUU6 356 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 CDV3Q9UKY7 258 aaKnown RBP13.13□□□□□ -0.31
DNMT1-201ENST00000340748 MZF1P28698 734 aaPredicted RBP13.13□□□□□ -0.31
DNMT1-201ENST00000340748 GRIK3Q13003 919 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 FLCNQ8NFG4 579 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 C12orf42Q96LP6 360 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 GPR20Q99678 358 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 IL1RAPL1Q9NZN1 696 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 NDRG2Q9UN36 371 aaKnown RBP13.13□□□□□ -0.31
DNMT1-201ENST00000340748 SHPRHQ149N8 1683 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 ENDOD1O94919 500 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 ALBP02768 609 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 LRRC38Q5VT99 294 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 TMCO5AQ8N6Q1 288 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 EPS8L1Q8TE68 723 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 HES6Q96HZ4 224 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 TSEN34Q9BSV6 310 aaKnown RBP13.13□□□□□ -0.31
DNMT1-201ENST00000340748 VTI1BQ9UEU0 232 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 FBXO10Q9UK96 956 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 CCL16O15467 120 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 FKBP6O75344 327 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 SERPINE1P05121 402 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 FAM153BP0C7A2 387 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 TPBGLP0DKB5 382 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 ADRM1Q16186 407 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 FAM153CQ494X1 144 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 SH3D19Q5HYK7 790 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 HDAC7Q8WUI4 952 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 BADQ92934 168 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 VPS50Q96JG6 964 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 VAT1Q99536 393 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 SH3GL3Q99963 347 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 ARHGAP39Q9C0H5 1083 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.13□□□□□ -0.31
DNMT1-201ENST00000340748 FAM153AQ9UHL3 310 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 COL16A1Q07092 1604 aaPredicted RBP13.13□□□□□ -0.31
DNMT1-201ENST00000340748 MON2Q7Z3U7 1717 aa13.13□□□□□ -0.31
DNMT1-201ENST00000340748 MEI4A8MW99 385 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 CRABP2P29373 138 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 GLRBP48167 497 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 CD151P48509 253 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 RHOAP61586 193 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 DAB2P98082 770 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 IL17AQ16552 155 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 HSDL1Q3SXM5 330 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 MARC1Q5VT66 337 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 TSHZ1Q6ZSZ6 1077 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 DSG4Q86SJ6 1040 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 TMEM86AQ8N2M4 240 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 LRRN4CLQ8ND94 238 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 NPLOC4Q8TAT6 608 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 LRRC39Q96DD0 335 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 SERPINB11Q96P15 392 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 SHCBP1LQ9BZQ2 653 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 RBM22Q9NW64 420 aaKnown RBP eCLIP13.12□□□□□ -0.315e-7■■■■□ 21.8
DNMT1-201ENST00000340748 PFKMP08237 780 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 PPP3CAQ08209 521 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 UBXN2BQ14CS0 331 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 BMT2Q1RMZ1 405 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 UNC93AQ86WB7 457 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 BBS7Q8IWZ6 715 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 SENP8Q96LD8 212 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 TTPALQ9BTX7 342 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 TUBGCP4Q9UGJ1 667 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 ANKRD26Q9UPS8 1709 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 COL1A2P08123 1366 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.12□□□□□ -0.31
DNMT1-201ENST00000340748 ABHD14A-ACY1A0A1B0GW23 586 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 UBTFL6P0CB48 400 aaPredicted RBP13.12□□□□□ -0.31
DNMT1-201ENST00000340748 ALADP13716 330 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 SOAT1P35610 550 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 NEK2P51955 445 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 BMPR2Q13873 1038 aa13.12□□□□□ -0.31
DNMT1-201ENST00000340748 SCARA3Q6AZY7 606 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms