RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 PDP2Q9P2J9 529 aa14.77□□□□□ -0.05
CPSF7-201ENST00000340437 CACNG4Q9UBN1 327 aa14.77□□□□□ -0.05
CPSF7-201ENST00000340437 APPL1Q9UKG1 709 aa14.77□□□□□ -0.05
CPSF7-201ENST00000340437 POMPQ9Y244 141 aa14.77□□□□□ -0.05
CPSF7-201ENST00000340437 TGFB3P10600 412 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 MX2P20592 715 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 NDUFV1P49821 464 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 ROR2Q01974 943 aaKnown RBP14.76□□□□□ -0.05
CPSF7-201ENST00000340437 NCBP2-AS2Q69YL0 99 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 KYAT3Q6YP21 454 aaKnown RBP14.76□□□□□ -0.05
CPSF7-201ENST00000340437 FAM156AQ8NDB6 213 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 PPP2R3CQ969Q6 453 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 MFSD3Q96ES6 412 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 LENG8Q96PV6 779 aaPredicted RBP14.76□□□□□ -0.05
CPSF7-201ENST00000340437 OR52B2Q96RD2 323 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 ZNF670Q9BS34 389 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 NUF2Q9BZD4 464 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 COPG2Q9UBF2 871 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 ASB3Q9Y575 518 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 M0QYT0 321 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 GSTA2P09210 222 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 CPOXP36551 454 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 CCNFP41002 786 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 CCNIQ14094 377 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 PDCD2Q16342 344 aaPredicted RBP14.76□□□□□ -0.05
CPSF7-201ENST00000340437 CERCAMQ5T4B2 595 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 TMEM198Q66K66 360 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 RNF111Q6ZNA4 994 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 CATSPER4Q7RTX7 472 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 GALNT15Q8N3T1 639 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 CNBD2Q96M20 576 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 ZMAT2Q96NC0 199 aaKnown RBP14.76□□□□□ -0.05
CPSF7-201ENST00000340437 MED10Q9BTT4 135 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 FRMD8Q9BZ67 464 aaPredicted RBP14.76□□□□□ -0.05
CPSF7-201ENST00000340437 SNX25Q9H3E2 840 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 ERAP1Q9NZ08 941 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 DCDC2Q9UHG0 476 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 PPME1Q9Y570 386 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 A0A0A0MRY4 1105 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 LTFP02788 710 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 POLBP06746 335 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 ADIGQ0VDE8 80 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 CNPY1Q3B7I2 92 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 SATL1Q86VE3 508 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 SNX32Q86XE0 403 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 SNX31Q8N9S9 440 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 ICA1LQ8NDH6 482 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 MAPK15Q8TD08 544 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 CMTM5Q96DZ9 223 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 TMA16Q96EY4 203 aaKnown RBP14.76□□□□□ -0.05
CPSF7-201ENST00000340437 SPATA13Q96N96 652 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 CATSPER2Q96P56 530 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 TASP1Q9H6P5 420 aa14.76□□□□□ -0.05
CPSF7-201ENST00000340437 IARS2Q9NSE4 1012 aaKnown RBP14.76□□□□□ -0.05
CPSF7-201ENST00000340437 C20orf96Q9NUD7 363 aaPredicted RBP14.76□□□□□ -0.05
CPSF7-201ENST00000340437 WDR81Q562E7 1941 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 COL11A1P12107 1806 aaPredicted RBP14.75□□□□□ -0.05
CPSF7-201ENST00000340437 A0A096LPK6 155 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 STX16-NPEPL1H3BU86 382 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 BIRC5O15392 142 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 ZBTB14O43829 449 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 GCATO75600 419 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 MCF2P10911 925 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 COX4I1P13073 169 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 MPSTP25325 297 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 ATICP31939 592 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 GARSP41250 739 aaKnown RBP14.75□□□□□ -0.05
CPSF7-201ENST00000340437 ARMC3Q5W041 872 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 NAPRTQ6XQN6 538 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 RIOX2Q8IUF8 465 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 MCUQ8NE86 351 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 ACVR1CQ8NER5 493 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 LRRC39Q96DD0 335 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 C12orf42Q96LP6 360 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 FCRL3Q96P31 734 aaPredicted RBP14.75□□□□□ -0.05
CPSF7-201ENST00000340437 CDRT15Q96T59 188 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 EIF2AQ9BY44 585 aaKnown RBP14.75□□□□□ -0.05
CPSF7-201ENST00000340437 SSX2IPQ9Y2D8 614 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 NME7Q9Y5B8 376 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 SNX10Q9Y5X0 201 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 FKBP6O75344 327 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 ITGAXP20702 1163 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 GNL1P36915 607 aaPredicted RBP14.75□□□□□ -0.05
CPSF7-201ENST00000340437 ARCQ7LC44 396 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 TDRD5Q8NAT2 981 aaKnown RBP14.75□□□□□ -0.05
CPSF7-201ENST00000340437 ZSCAN18Q8TBC5 510 aaPredicted RBP14.75□□□□□ -0.05
CPSF7-201ENST00000340437 MPHOSPH6Q99547 160 aaKnown RBP14.75□□□□□ -0.05
CPSF7-201ENST00000340437 OMDQ99983 421 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 FERMT1Q9BQL6 677 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 CENPKQ9BS16 269 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 ASB7Q9H672 318 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.75□□□□□ -0.055e-9■■□□□ 12.4
CPSF7-201ENST00000340437 MOCS1Q9NZB8 636 aa14.75□□□□□ -0.05
CPSF7-201ENST00000340437 ADM5C9JUS6 153 aa14.74□□□□□ -0.05
CPSF7-201ENST00000340437 MT-CO1P00395 513 aa14.74□□□□□ -0.05
CPSF7-201ENST00000340437 MYCP01106 439 aaPredicted RBP14.74□□□□□ -0.05
CPSF7-201ENST00000340437 NELFEP18615 380 aaKnown RBP14.74□□□□□ -0.05
CPSF7-201ENST00000340437 RAB27AP51159 221 aa14.74□□□□□ -0.05
CPSF7-201ENST00000340437 RNF135Q8IUD6 432 aa14.74□□□□□ -0.05
CPSF7-201ENST00000340437 SORT1Q99523 831 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms