RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 UBAP1Q9NZ09 502 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 SF3B1O75533 1304 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 ZNF195O14628 629 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 PAPSS1O43252 624 aaPredicted RBP12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 LTFP02788 710 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 CHRNGP07510 517 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 TCN1P20061 433 aaPredicted RBP12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 SAT1P21673 171 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 MAGEA3P43357 314 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 RABGGTBP53611 331 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 MRPS22P82650 360 aaKnown RBP12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 PPP2R5DQ14738 602 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 PDK3Q15120 406 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 TMEM198Q66K66 360 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 ACAD11Q709F0 780 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 ZBTB8OSQ8IWT0 167 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 CXorf38Q8TB03 319 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 HPDLQ96IR7 371 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 AGAP2Q99490 1192 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 FRMD8P1Q9BZ68 369 aaPredicted RBP12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 TSPYL2Q9H2G4 693 aaPredicted RBP12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 DPEP3Q9H4B8 488 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 PRDM16Q9HAZ2 1276 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 NRBP2Q9NSY0 501 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 PHF24Q9UPV7 400 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 PCDHA11Q9Y5I1 949 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 IGKV6D-21A0A0A0MT36 114 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 SOWAHBA6NEL2 793 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 TSHRP16473 764 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 ITGA7Q13683 1181 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 VGLL4Q14135 290 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 FAM47CQ5HY64 1035 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 TREML2Q5T2D2 321 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 OLFML1Q6UWY5 402 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 KYAT3Q6YP21 454 aaKnown RBP12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 FAM131BQ86XD5 332 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 APOL2Q9BQE5 337 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 MRPL45Q9BRJ2 306 aaKnown RBP12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 KLHL4Q9C0H6 718 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 COG4Q9H9E3 785 aa12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 DDX18Q9NVP1 670 aaKnown RBP12.28□□□□□ -0.44
CCDC144CP-201ENST00000340196 LCTP09848 1927 aa12.27□□□□□ -0.44
CCDC144CP-201ENST00000340196 C15orf38-AP3S2A0A0A6YYH1 394 aa12.27□□□□□ -0.44
CCDC144CP-201ENST00000340196 CCDC160A6NGH7 325 aa12.27□□□□□ -0.44
CCDC144CP-201ENST00000340196 ADM5C9JUS6 153 aa12.27□□□□□ -0.44
CCDC144CP-201ENST00000340196 CFLARO15519 480 aa12.27□□□□□ -0.44
CCDC144CP-201ENST00000340196 B4GALT4O60513 344 aa12.27□□□□□ -0.44
CCDC144CP-201ENST00000340196 JUNP05412 331 aaKnown RBP12.27□□□□□ -0.44
CCDC144CP-201ENST00000340196 ITGA2BP08514 1039 aa12.27□□□□□ -0.44
CCDC144CP-201ENST00000340196 UQCRBP14927 111 aa12.27□□□□□ -0.44
CCDC144CP-201ENST00000340196 SDC4P31431 198 aa12.27□□□□□ -0.44
CCDC144CP-201ENST00000340196 GABRB2P47870 512 aa12.27□□□□□ -0.44
CCDC144CP-201ENST00000340196 FOLH1Q04609 750 aa12.27□□□□□ -0.44
CCDC144CP-201ENST00000340196 GLRA4Q5JXX5 417 aa12.27□□□□□ -0.44
CCDC144CP-201ENST00000340196 SLC9A4Q6AI14 798 aa12.27□□□□□ -0.44
CCDC144CP-201ENST00000340196 ARPINQ7Z6K5 226 aa12.27□□□□□ -0.44
CCDC144CP-201ENST00000340196 LENG8Q96PV6 779 aaPredicted RBP12.27□□□□□ -0.44
CCDC144CP-201ENST00000340196 MTMR10Q9NXD2 777 aa12.27□□□□□ -0.44
CCDC144CP-201ENST00000340196 MOCS1Q9NZB8 636 aa12.27□□□□□ -0.44
CCDC144CP-201ENST00000340196 DTLQ9NZJ0 730 aa12.27□□□□□ -0.44
CCDC144CP-201ENST00000340196 RBM47A0AV96 593 aaKnown RBP12.27□□□□□ -0.45
CCDC144CP-201ENST00000340196 GLTPD2A6NH11 291 aa12.27□□□□□ -0.45
CCDC144CP-201ENST00000340196 KCNK1O00180 336 aa12.27□□□□□ -0.45
CCDC144CP-201ENST00000340196 LCP1P13796 627 aa12.27□□□□□ -0.45
CCDC144CP-201ENST00000340196 PSMB4P28070 264 aa12.27□□□□□ -0.45
CCDC144CP-201ENST00000340196 EPHA3P29320 983 aa12.27□□□□□ -0.45
CCDC144CP-201ENST00000340196 TYK2P29597 1187 aa12.27□□□□□ -0.45
CCDC144CP-201ENST00000340196 AP3M2P53677 418 aa12.27□□□□□ -0.45
CCDC144CP-201ENST00000340196 TTLL12Q14166 644 aaPredicted RBP12.27□□□□□ -0.45
CCDC144CP-201ENST00000340196 PGM2L1Q6PCE3 622 aa12.27□□□□□ -0.45
CCDC144CP-201ENST00000340196 IYDQ6PHW0 289 aa12.27□□□□□ -0.45
CCDC144CP-201ENST00000340196 TMC7Q7Z402 723 aa12.27□□□□□ -0.45
CCDC144CP-201ENST00000340196 SPATA24Q86W54 205 aa12.27□□□□□ -0.45
CCDC144CP-201ENST00000340196 ST13P4Q8IZP2 240 aaPredicted RBP12.27□□□□□ -0.45
CCDC144CP-201ENST00000340196 SNX31Q8N9S9 440 aa12.27□□□□□ -0.45
CCDC144CP-201ENST00000340196 ARNTL2Q8WYA1 636 aa12.27□□□□□ -0.45
CCDC144CP-201ENST00000340196 CCDC97Q96F63 343 aaPredicted RBP12.27□□□□□ -0.45
CCDC144CP-201ENST00000340196 KCTD15Q96SI1 283 aaPredicted RBP12.27□□□□□ -0.45
CCDC144CP-201ENST00000340196 HEMK1Q9Y5R4 338 aaPredicted RBP12.27□□□□□ -0.45
CCDC144CP-201ENST00000340196 BCLAF3A2AJT9 711 aaKnown RBP12.26□□□□□ -0.45
CCDC144CP-201ENST00000340196 TRDMT1O14717 391 aaKnown RBP12.26□□□□□ -0.45
CCDC144CP-201ENST00000340196 MFSD11O43934 449 aa12.26□□□□□ -0.45
CCDC144CP-201ENST00000340196 VTNP04004 478 aa12.26□□□□□ -0.45
CCDC144CP-201ENST00000340196 RALBP11234 206 aa12.26□□□□□ -0.45
CCDC144CP-201ENST00000340196 PROZP22891 400 aa12.26□□□□□ -0.45
CCDC144CP-201ENST00000340196 EPHX2P34913 555 aa12.26□□□□□ -0.45
CCDC144CP-201ENST00000340196 NUDT2P50583 147 aa12.26□□□□□ -0.45
CCDC144CP-201ENST00000340196 EFNA5P52803 228 aa12.26□□□□□ -0.45
CCDC144CP-201ENST00000340196 MBTD1Q05BQ5 628 aa12.26□□□□□ -0.45
CCDC144CP-201ENST00000340196 DYNC1I2Q13409 638 aaKnown RBP12.26□□□□□ -0.45
CCDC144CP-201ENST00000340196 SOWAHAQ2M3V2 549 aa12.26□□□□□ -0.45
CCDC144CP-201ENST00000340196 SLC10A6Q3KNW5 377 aa12.26□□□□□ -0.45
CCDC144CP-201ENST00000340196 HEATR6Q6AI08 1181 aaKnown RBP12.26□□□□□ -0.45
CCDC144CP-201ENST00000340196 EFCAB12Q6NXP0 572 aa12.26□□□□□ -0.45
CCDC144CP-201ENST00000340196 GALNT4Q8N4A0 578 aa12.26□□□□□ -0.45
CCDC144CP-201ENST00000340196 METTL25Q8N6Q8 603 aa12.26□□□□□ -0.45
CCDC144CP-201ENST00000340196 NAT14Q8WUY8 206 aa12.26□□□□□ -0.45
CCDC144CP-201ENST00000340196 RTP4Q96DX8 246 aa12.26□□□□□ -0.45
CCDC144CP-201ENST00000340196 MPP4Q96JB8 637 aa12.26□□□□□ -0.45
CCDC144CP-201ENST00000340196 CNBD2Q96M20 576 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms