RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 IGSF8Q969P0 613 aa18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 MYEOVQ96EZ4 313 aa18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 ASIC4Q96FT7 647 aa18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 OSBPL9Q96SU4 736 aa18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 RPP25Q9BUL9 199 aaKnown RBP18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 TRMT61BQ9BVS5 477 aaKnown RBP18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 ZYG11BQ9C0D3 744 aa18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 SPHK2Q9NRA0 654 aa18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 MARK1Q9P0L2 795 aa18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 STIM2Q9P246 746 aa18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 EFR3BQ9Y2G0 817 aa18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 hCG_1818297A0A087WSY0 165 aa18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 TYW5A2RUC4 315 aaKnown RBP18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 WASH4PA8MWX3 477 aa18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 TSPAN3O60637 253 aa18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 NFATC1O95644 943 aa18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 CYBBP04839 570 aa18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 RHOQP17081 205 aa18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 EPHB2P29323 1055 aa18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 VCPP55072 806 aaKnown RBP18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 MMRN1Q13201 1228 aa18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 ZNF211Q13398 564 aaPredicted RBP18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 GRM2Q14416 872 aa18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 ANKRD20A8PQ5CZ79 823 aa18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 SEL1L2Q5TEA6 688 aa18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 RWDD4Q6NW29 188 aaKnown RBP18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 ANKS1BQ7Z6G8 1248 aa18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 ADHFE1Q8IWW8 467 aa18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 PCDH19Q8TAB3 1148 aa18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 ATXN2LQ8WWM7 1075 aaKnown RBP18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 IRF7Q92985 503 aa18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 TMA16Q96EY4 203 aaKnown RBP18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 RNF157Q96PX1 679 aa18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 PSMB7Q99436 277 aa18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 CATSPERBQ9H7T0 1116 aa18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 KCNK12Q9HB15 430 aa18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 ARHGEF4Q9NR80 690 aa18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 LIMD1Q9UGP4 676 aa18.43■□□□□ 0.54
SDCBP2-201ENST00000339987 A0A1B0GVM2 712 aa18.42■□□□□ 0.54
SDCBP2-201ENST00000339987 TCAF2A6NFQ2 919 aa18.42■□□□□ 0.54
SDCBP2-201ENST00000339987 TRDMT1O14717 391 aaKnown RBP18.42■□□□□ 0.54
SDCBP2-201ENST00000339987 DAPK3O43293 454 aa18.42■□□□□ 0.54
SDCBP2-201ENST00000339987 PENKP01210 267 aaPredicted RBP18.42■□□□□ 0.54
SDCBP2-201ENST00000339987 SGSHP51688 502 aa18.42■□□□□ 0.54
SDCBP2-201ENST00000339987 RPS24P62847 133 aaKnown RBP18.42■□□□□ 0.54
SDCBP2-201ENST00000339987 AMPD2Q01433 879 aa18.42■□□□□ 0.54
SDCBP2-201ENST00000339987 RHBDF2Q6PJF5 856 aa18.42■□□□□ 0.54
SDCBP2-201ENST00000339987 CHST9Q7L1S5 443 aa18.42■□□□□ 0.54
SDCBP2-201ENST00000339987 NLRP14Q86W24 1093 aa18.42■□□□□ 0.54
SDCBP2-201ENST00000339987 OSBPL8Q9BZF1 889 aa18.42■□□□□ 0.54
SDCBP2-201ENST00000339987 ZNF212Q9UDV6 495 aa18.42■□□□□ 0.54
SDCBP2-201ENST00000339987 SAR1BQ9Y6B6 198 aa18.42■□□□□ 0.54
SDCBP2-201ENST00000339987 DOCK4Q8N1I0 1966 aa18.42■□□□□ 0.54
SDCBP2-201ENST00000339987 DCLK1O15075 740 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 HOXC11O43248 304 aaPredicted RBP18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 CLDN11O75508 207 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 ADH1CP00326 375 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 CYP17A1P05093 508 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 ARSAP15289 507 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 ERCC2P18074 760 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 AMPD1P23109 780 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 GDI1P31150 447 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 CXCR5P32302 372 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 IRAK1P51617 712 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 CDH4P55283 916 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 ZP2Q05996 745 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 TFDP2Q14188 446 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 DHCR24Q15392 516 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 ALFQ53S48 1182 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 LY6G5CQ5SRR4 150 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 FYB2Q5VWT5 728 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 TRIM68Q6AZZ1 485 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 AADACL2Q6P093 401 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 TMEM25Q86YD3 366 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 CFAP52Q8N1V2 620 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 RASGEF1CQ8N431 466 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 PQLC3Q8N755 202 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 RTL3Q8N8U3 475 aaKnown RBP18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 RSAD2Q8WXG1 361 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 ZFYVE19Q96K21 471 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 MAK16Q9BXY0 300 aaKnown RBP18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 HPS4Q9NQG7 708 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 TMEM248Q9NWD8 314 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 DONSONQ9NYP3 566 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 MPP6Q9NZW5 540 aa18.41■□□□□ 0.54
SDCBP2-201ENST00000339987 ARNTLO00327 626 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 TBL1XO60907 577 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 CNTN5O94779 1100 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 KRT10P13645 584 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 ZFXP17010 805 aaPredicted RBP18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 HOXD9P28356 352 aaPredicted RBP18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 MAPKAPK2P49137 400 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 SLC9A4Q6AI14 798 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 TPGS1Q6ZTW0 290 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 BBS12Q6ZW61 710 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 RFX6Q8HWS3 928 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 SLC44A3Q8N4M1 653 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 CPA6Q8N4T0 437 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 KIF18AQ8NI77 898 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms