RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 THAP12O43422 761 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 SEMA4FO95754 770 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 MOCS2O96007 188 aaPredicted RBP11.05□□□□□ -0.64
CAPN3-202ENST00000337571 BMP6P22004 513 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 ACSL1P33121 698 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 NNMTP40261 264 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 SGSHP51688 502 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 RPS14P62263 151 aaKnown RBP11.05□□□□□ -0.64
CAPN3-202ENST00000337571 YWHAZP63104 245 aaKnown RBP11.05□□□□□ -0.64
CAPN3-202ENST00000337571 NNTQ13423 1086 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 PTPRNQ16849 979 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 HLA-BQ31612 363 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 FAM133BQ5BKY9 247 aaKnown RBP11.05□□□□□ -0.64
CAPN3-202ENST00000337571 ZNF776Q68DI1 518 aaPredicted RBP11.05□□□□□ -0.64
CAPN3-202ENST00000337571 LRSAM1Q6UWE0 723 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 CFAP52Q8N1V2 620 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 KDF1Q8NAX2 398 aaPredicted RBP11.05□□□□□ -0.64
CAPN3-202ENST00000337571 ADAM32Q8TC27 787 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 DQX1Q8TE96 717 aaKnown RBP11.05□□□□□ -0.64
CAPN3-202ENST00000337571 ZNF606Q8WXB4 792 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 RNF34Q969K3 372 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 KREMEN1Q96MU8 473 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 CAMK1GQ96NX5 476 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 ZSWIM1Q9BR11 485 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 THAP9Q9H5L6 903 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 POPDC2Q9HBU9 364 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 SGK2Q9HBY8 427 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 TM7SF3Q9NS93 570 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.05□□□□□ -0.64
CAPN3-202ENST00000337571 KIAA1522Q9P206 1035 aaPredicted RBP11.05□□□□□ -0.64
CAPN3-202ENST00000337571 ZMIZ1Q9ULJ6 1067 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 WASF3Q9UPY6 502 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 CNTN6Q9UQ52 1028 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 APOBEC2Q9Y235 224 aaKnown RBP11.05□□□□□ -0.64
CAPN3-202ENST00000337571 MSRB2Q9Y3D2 182 aa11.05□□□□□ -0.64
CAPN3-202ENST00000337571 PCNX2A6NKB5 2137 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 GADD45BO75293 160 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-202ENST00000337571 GJB3O75712 270 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 FSBPO95073 299 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 FYNP06241 537 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 SRPRAP08240 638 aaKnown RBP11.04□□□□□ -0.64
CAPN3-202ENST00000337571 ZNF883P0CG24 379 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 SLC2A3P11169 496 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 GNA15P30679 374 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 CSKP41240 450 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 CSNK1EP49674 416 aaKnown RBP11.04□□□□□ -0.64
CAPN3-202ENST00000337571 SNX16P57768 344 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 RPS24P62847 133 aaKnown RBP11.04□□□□□ -0.64
CAPN3-202ENST00000337571 FAM193AP78312 1265 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 TPD52L1Q16890 204 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-202ENST00000337571 ARHGAP44Q17R89 818 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 MS4A13Q5J8X5 152 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 DENND1BQ6P3S1 775 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 GBP6Q6ZN66 633 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 BEND5Q7L4P6 421 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 ADAT2Q7Z6V5 191 aaKnown RBP11.04□□□□□ -0.64
CAPN3-202ENST00000337571 LGI2Q8N0V4 545 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 CHCHD4Q8N4Q1 142 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 ATP6V0D2Q8N8Y2 350 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 TTC17Q96AE7 1141 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 SKA1Q96BD8 255 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 BTN2A3PQ96KV6 586 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 FCRL2Q96LA5 508 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-202ENST00000337571 NOX5Q96PH1 765 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 PPP1R9BQ96SB3 815 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 OMDQ99983 421 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 SLC4A5Q9BY07 1137 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 C6orf106Q9H6K1 298 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-202ENST00000337571 RWDD2AQ9UIY3 292 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-202ENST00000337571 MAP1BP46821 2468 aaKnown RBP11.04□□□□□ -0.64
CAPN3-202ENST00000337571 WDFY3Q8IZQ1 3526 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 CACNA1BQ00975 2339 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 CFAP47Q6ZTR5 3102 aa11.04□□□□□ -0.64
CAPN3-202ENST00000337571 A0A1B0GVT2 93 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 TARSL2A2RTX5 802 aaKnown RBP11.03□□□□□ -0.64
CAPN3-202ENST00000337571 FAM47DPA6NHR8 397 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 E5RJQ4 531 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 F5H5T6 163 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 LUC7L3O95232 432 aaKnown RBP11.03□□□□□ -0.64
CAPN3-202ENST00000337571 TRUB2O95900 331 aaKnown RBP11.03□□□□□ -0.64
CAPN3-202ENST00000337571 ABCB4P21439 1286 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 CD27P26842 260 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 RPL34P49207 117 aaKnown RBP11.03□□□□□ -0.64
CAPN3-202ENST00000337571 CDK17Q00537 523 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 ECT2LQ008S8 904 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 PTK2Q05397 1052 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 CAMK4Q16566 473 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 MEA1Q16626 185 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 DCAF6Q58WW2 860 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 ZC3H12AQ5D1E8 599 aaKnown RBP11.03□□□□□ -0.64
CAPN3-202ENST00000337571 EFHC1Q5JVL4 640 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 SYPL2Q5VXT5 272 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 NADSYN1Q6IA69 706 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 USP30Q70CQ3 517 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 TMEM110Q86TL2 294 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 TAC4Q86UU9 113 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 CHSY1Q86X52 802 aa11.03□□□□□ -0.64
CAPN3-202ENST00000337571 DHX40Q8IX18 779 aaKnown RBP11.03□□□□□ -0.64
CAPN3-202ENST00000337571 KDM1BQ8NB78 822 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms