RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 CHST9Q7L1S5 443 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 DAAM2Q86T65 1068 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 RHOT1Q8IXI2 618 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 SYCE1Q8N0S2 351 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 CFAP52Q8N1V2 620 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 NAT16Q8N8M0 369 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 CCDC26Q8TAB7 109 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 FIBINQ8TAL6 211 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 KIAA1524Q8TCG1 905 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 BHMTQ93088 406 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 IGSF8Q969P0 613 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 PBXIP1Q96AQ6 731 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 PEBP4Q96S96 227 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 MFSD1Q9H3U5 465 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 DHX35Q9H5Z1 703 aaKnown RBP15.86■□□□□ 0.13
SEC13-201ENST00000337354 ZWILCHQ9H900 591 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 DNAJC17Q9NVM6 304 aaKnown RBP15.86■□□□□ 0.13
SEC13-201ENST00000337354 STIM2Q9P246 746 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 PPP2R2CQ9Y2T4 447 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.85■□□□□ 0.13
SEC13-201ENST00000337354 MACROD2A1Z1Q3 448 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 SHISA7A6NL88 538 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 H0Y626 953 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 NCAM2O15394 837 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 SPOPO43791 374 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 LRIG2O94898 1065 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 CISD3P0C7P0 127 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 COMTP21964 271 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 GRIA2P42262 883 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 SLC6A11P48066 632 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 DGKGP49619 791 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 SEMA3BQ13214 749 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 ZNF177Q13360 481 aaPredicted RBP15.85■□□□□ 0.13
SEC13-201ENST00000337354 KCNT1Q5JUK3 1230 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 DAB2IPQ5VWQ8 1189 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 GRAMD4Q6IC98 578 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 TXNDC11Q6PKC3 985 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 MFN1Q8IWA4 741 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 MAP7D3Q8IWC1 876 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 CCAR2Q8N163 923 aaKnown RBP15.85■□□□□ 0.13
SEC13-201ENST00000337354 TBC1D31Q96DN5 1066 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 MYEOVQ96EZ4 313 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 P2RY11Q96G91 374 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 SNX10Q9Y5X0 201 aa15.85■□□□□ 0.13
SEC13-201ENST00000337354 MIA3Q5JRA6 1907 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 FAM72CH0Y354 149 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 TIMM44O43615 452 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 LUC7L3O95232 432 aaKnown RBP15.84■□□□□ 0.13
SEC13-201ENST00000337354 APODP05090 189 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 TCF4P15884 667 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 RHOQP17081 205 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 EPHB2P29323 1055 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 HOXC13P31276 330 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 GGCXP38435 758 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 SGSHP51688 502 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 SLC12A1Q13621 1099 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 CDH18Q13634 790 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 PDK2Q15119 407 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 FBXO43Q4G163 708 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 FAM72AQ5TYM5 149 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 FAM72DQ6L9T8 149 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 BMP8AQ7Z5Y6 402 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 SETD3Q86TU7 594 aaPredicted RBP15.84■□□□□ 0.13
SEC13-201ENST00000337354 C12orf40Q86WS4 652 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 FAM72BQ86X60 149 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 PYROXD2Q8N2H3 581 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 SYNPOQ8N3V7 929 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 CARNMT1Q8N4J0 409 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 FAM71BQ8TC56 605 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 CATSPERBQ9H7T0 1116 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 FBRSL1Q9HCM7 1045 aaKnown RBP15.84■□□□□ 0.13
SEC13-201ENST00000337354 ARHGEF4Q9NR80 690 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.84■□□□□ 0.13
SEC13-201ENST00000337354 DDX56Q9NY93 547 aaKnown RBP15.84■□□□□ 0.13
SEC13-201ENST00000337354 KIAA1522Q9P206 1035 aaPredicted RBP15.84■□□□□ 0.13
SEC13-201ENST00000337354 RCOR3Q9P2K3 495 aaPredicted RBP15.84■□□□□ 0.13
SEC13-201ENST00000337354 TRIM10Q9UDY6 481 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 GUCA1BQ9UMX6 200 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 TBC1D30Q9Y2I9 924 aa15.84■□□□□ 0.13
SEC13-201ENST00000337354 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.84■□□□□ 0.13
SEC13-201ENST00000337354 TRIOO75962 3097 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 A0A0U1RQJ8 604 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 TBC1D3BA6NDS4 549 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 STK25O00506 426 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 FGF10O15520 208 aaPredicted RBP15.83■□□□□ 0.12
SEC13-201ENST00000337354 PSTPIP1O43586 416 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 CREB3O43889 395 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 KAT7O95251 611 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 PDGFBP01127 241 aaPredicted RBP15.83■□□□□ 0.12
SEC13-201ENST00000337354 CD72P21854 359 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 ARL4AP40617 200 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 TNFRSF4P43489 277 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 TAS2R40P59535 323 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 DMC1Q14565 340 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 PON2Q15165 354 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 E2F5Q15329 346 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 CA9Q16790 459 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 SMTNL2Q2TAL5 461 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 DGKKQ5KSL6 1271 aa15.83■□□□□ 0.12
SEC13-201ENST00000337354 ARTNQ5T4W7 220 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms