RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 SLC24A2Q9UI40 661 aa12.17□□□□□ -0.46
LIMK2-202ENST00000333611 SHOC2Q9UQ13 582 aa12.17□□□□□ -0.46
LIMK2-202ENST00000333611 COL5A3P25940 1745 aaPredicted RBP12.17□□□□□ -0.46
LIMK2-202ENST00000333611 TMEM191CA6NGB0 347 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 TMEM191BP0C7N4 346 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 ZNF182P17025 639 aaPredicted RBP12.16□□□□□ -0.46
LIMK2-202ENST00000333611 CDH6P55285 790 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 WDR45BQ5MNZ6 344 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 TMEM26Q6ZUK4 368 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 NEK10Q6ZWH5 1172 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 ZNF677Q86XU0 584 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 NETO2Q8NC67 525 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 OMA1Q96E52 524 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 CISHQ9NSE2 258 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 MICAL3Q7RTP6 2002 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 SPDYE2BA6NHP3 402 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 PEX10O60683 326 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 CALB1P05937 261 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 ASNSP08243 561 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 SPDYE6P0CI01 402 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 CDKN2BP42772 138 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 CDKL1Q00532 357 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 BFSP2Q13515 415 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 FGD3Q5JSP0 725 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 TRIM72Q6ZMU5 477 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 TAS1R3Q7RTX0 852 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 FAM47BQ8NA70 645 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 MCPH1Q8NEM0 835 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 CYGBQ8WWM9 190 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 SLC7A3Q8WY07 619 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 AGAP3Q96P47 875 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 TRPV5Q9NQA5 729 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 ANKEF1Q9NU02 776 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 CDH22Q9UJ99 828 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 DNAJC16Q9Y2G8 782 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 TIMM22Q9Y584 194 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 ZNF536O15090 1300 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 TCRBV9S1A1TA0A576 114 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 YDJCA8MPS7 323 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 MGEA5O60502 916 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 CSDE1O75534 798 aaKnown RBP12.16□□□□□ -0.46
LIMK2-202ENST00000333611 DGAT1O75907 488 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 C4BPAP04003 597 aaKnown RBP12.16□□□□□ -0.46
LIMK2-202ENST00000333611 PSAPP07602 524 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 MMP8P22894 467 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 IL1R2P27930 398 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 DENND1BQ6P3S1 775 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 TFAP2BQ92481 460 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 HDAC2Q92769 488 aaKnown RBP12.16□□□□□ -0.46
LIMK2-202ENST00000333611 GJD4Q96KN9 370 aaPredicted RBP12.16□□□□□ -0.46
LIMK2-202ENST00000333611 MTG1Q9BT17 334 aaPredicted RBP12.16□□□□□ -0.46
LIMK2-202ENST00000333611 JPH1Q9HDC5 661 aaPredicted RBP12.16□□□□□ -0.46
LIMK2-202ENST00000333611 NGRNQ9NPE2 291 aaKnown RBP12.16□□□□□ -0.46
LIMK2-202ENST00000333611 PXMP2Q9NR77 195 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 SLC38A7Q9NVC3 462 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 EPS15L1Q9UBC2 864 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 POLIQ9UNA4 740 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 MYRFQ9Y2G1 1151 aa12.16□□□□□ -0.46
LIMK2-202ENST00000333611 A0A088AWK7 358 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 TEX28O15482 410 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 KCNN4O15554 427 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 USP12O75317 370 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 DLDP09622 509 aaKnown RBP12.15□□□□□ -0.46
LIMK2-202ENST00000333611 ACO1P21399 889 aaKnown RBP12.15□□□□□ -0.46
LIMK2-202ENST00000333611 SFNP31947 248 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 HSD17B4P51659 736 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 SMU1Q2TAY7 513 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 EFHC2Q5JST6 749 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 TTLL6Q8N841 843 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 UBA3Q8TBC4 463 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 ATXN7L3BQ96GX2 97 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 RPAP3Q9H6T3 665 aaPredicted RBP12.15□□□□□ -0.46
LIMK2-202ENST00000333611 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.15□□□□□ -0.46
LIMK2-202ENST00000333611 FIS1Q9Y3D6 152 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 SAC3D1A6NKF1 404 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 FAM47E-STBD1D6RA91 191 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 GRK2P25098 689 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 NDST2P52849 883 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 IST1P53990 364 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 ACTR2P61160 394 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 EN1Q05925 392 aaPredicted RBP12.15□□□□□ -0.46
LIMK2-202ENST00000333611 C1QBPQ07021 282 aaKnown RBP12.15□□□□□ -0.46
LIMK2-202ENST00000333611 NSUN2Q08J23 767 aaKnown RBP eCLIP12.15□□□□□ -0.46
LIMK2-202ENST00000333611 ZNF699Q32M78 642 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 PPM1LQ5SGD2 360 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 DEPDC1Q5TB30 811 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 C16orf46Q6P387 395 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 CDHR3Q6ZTQ4 885 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 PSD4Q8NDX1 1056 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 BHLHE22Q8NFJ8 381 aaPredicted RBP12.15□□□□□ -0.46
LIMK2-202ENST00000333611 ADAM32Q8TC27 787 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 CDRT15Q96T59 188 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 FOXP3Q9BZS1 431 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 ACSS3Q9H6R3 686 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 POLR1BQ9H9Y6 1135 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 TBC1D14Q9P2M4 693 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 SATB2Q9UPW6 733 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 KIF13BQ9NQT8 1826 aa12.15□□□□□ -0.46
LIMK2-202ENST00000333611 KRBA1A5PL33 1030 aa12.14□□□□□ -0.47
LIMK2-202ENST00000333611 ANKRD34BA5PLL1 514 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms