RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 CCDC163A0A0D9SF12 145 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 PGRMC1O00264 195 aaKnown RBP10.1□□□□□ -0.79
SYN3-201ENST00000332840 RNF40O75150 1001 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 TBX18O95935 607 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 APODP05090 189 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 TUBBP07437 444 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 IRF1P10914 325 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 MAN1A1P33908 653 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 CTNNA1P35221 906 aaKnown RBP10.1□□□□□ -0.79
SYN3-201ENST00000332840 CHKAP35790 457 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 GRIA2P42262 883 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 HARS2P49590 506 aaKnown RBP10.1□□□□□ -0.79
SYN3-201ENST00000332840 PEX5P50542 639 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 PDCLQ13371 301 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 PIGHQ14442 188 aaPredicted RBP10.1□□□□□ -0.79
SYN3-201ENST00000332840 E2F5Q15329 346 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 LY6G5CQ5SRR4 150 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 PPP1R15BQ5SWA1 713 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 SEL1L2Q5TEA6 688 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 RHBDF2Q6PJF5 856 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 Q6ZS52 159 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 XYLT1Q86Y38 959 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 BBS7Q8IWZ6 715 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 MMGT1Q8N4V1 131 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 CAMKK1Q8N5S9 505 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 SPATA4Q8NEY3 305 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 KCNV2Q8TDN2 545 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 PLD4Q96BZ4 506 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 CHFRQ96EP1 664 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 XPO6Q96QU8 1125 aaKnown RBP10.1□□□□□ -0.79
SYN3-201ENST00000332840 CPXM1Q96SM3 734 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 NAP1L3Q99457 506 aaPredicted RBP10.1□□□□□ -0.79
SYN3-201ENST00000332840 SLC4A5Q9BY07 1137 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 ARHGEF4Q9NR80 690 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 RBM12Q9NTZ6 932 aaKnown RBP10.1□□□□□ -0.79
SYN3-201ENST00000332840 OSER1Q9NX31 292 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 MARK1Q9P0L2 795 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 MARCH2Q9P0N8 246 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 DEC1Q9P2X7 70 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 RASAL2Q9UJF2 1139 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 TTC7AQ9ULT0 858 aaPredicted RBP10.1□□□□□ -0.79
SYN3-201ENST00000332840 SLC8A2Q9UPR5 921 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 HBS1LQ9Y450 684 aaKnown RBP10.1□□□□□ -0.79
SYN3-201ENST00000332840 COL4A2P08572 1712 aa10.1□□□□□ -0.79
SYN3-201ENST00000332840 GOLGA8SH3BPF8 625 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 LILRB5O75023 590 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 STC2O76061 302 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 LATS1O95835 1130 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 EGFP01133 1207 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 ERBB2P04626 1255 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 CYBBP04839 570 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 KRT3P12035 628 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 TDGF1P13385 188 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 OPRD1P41143 372 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 PGFP49763 221 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 RWDD2BP57060 319 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 DAOAP59103 153 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 MRPS21P82921 87 aaKnown RBP10.09□□□□□ -0.79
SYN3-201ENST00000332840 SATB1Q01826 763 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 EFEMP1Q12805 493 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 GAS6Q14393 721 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 RSPO4Q2I0M5 234 aaPredicted RBP10.09□□□□□ -0.79
SYN3-201ENST00000332840 ANO4Q32M45 955 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 BSPRYQ5W0U4 402 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 OR6B2Q6IFH4 312 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 Q6ZNB5 142 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 BEND5Q7L4P6 421 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 SYT13Q7L8C5 426 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 TRMT11Q7Z4G4 463 aaKnown RBP10.09□□□□□ -0.79
SYN3-201ENST00000332840 TMEM110Q86TL2 294 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 LONP2Q86WA8 852 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 ZDHHC17Q8IUH5 632 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 NOA1Q8NC60 698 aaKnown RBP10.09□□□□□ -0.79
SYN3-201ENST00000332840 FNIP1Q8TF40 1166 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 ANKRD7Q92527 254 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 RNF25Q96BH1 459 aaPredicted RBP10.09□□□□□ -0.79
SYN3-201ENST00000332840 MS4A14Q96JA4 679 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 MCEEQ96PE7 176 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 TRIM7Q9C029 511 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 EPC1Q9H2F5 836 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 ST7Q9NRC1 585 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 RAB23Q9ULC3 237 aa10.09□□□□□ -0.79
SYN3-201ENST00000332840 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.09□□□□□ -0.79
SYN3-201ENST00000332840 A0A0A0MRY4 1105 aa10.08□□□□□ -0.8
SYN3-201ENST00000332840 CCDC188H7C350 402 aa10.08□□□□□ -0.8
SYN3-201ENST00000332840 TULP2O00295 520 aa10.08□□□□□ -0.8
SYN3-201ENST00000332840 SCAMP3O14828 347 aaKnown RBP10.08□□□□□ -0.8
SYN3-201ENST00000332840 PSTPIP1O43586 416 aa10.08□□□□□ -0.8
SYN3-201ENST00000332840 CACNG3O60359 315 aa10.08□□□□□ -0.8
SYN3-201ENST00000332840 GREM1O60565 184 aa10.08□□□□□ -0.8
SYN3-201ENST00000332840 KAT7O95251 611 aa10.08□□□□□ -0.8
SYN3-201ENST00000332840 GJB6O95452 261 aa10.08□□□□□ -0.8
SYN3-201ENST00000332840 LTFP02788 710 aa10.08□□□□□ -0.8
SYN3-201ENST00000332840 LCP1P13796 627 aa10.08□□□□□ -0.8
SYN3-201ENST00000332840 CORO1AP31146 461 aaKnown RBP10.08□□□□□ -0.8
SYN3-201ENST00000332840 SCNN1AP37088 669 aa10.08□□□□□ -0.8
SYN3-201ENST00000332840 CETN2P41208 172 aa10.08□□□□□ -0.8
SYN3-201ENST00000332840 TNFRSF4P43489 277 aa10.08□□□□□ -0.8
SYN3-201ENST00000332840 RPL34P49207 117 aaKnown RBP10.08□□□□□ -0.8
SYN3-201ENST00000332840 RPL7AP62424 266 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms