RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 ADAMTS16Q8TE57 1224 aa24.92■■□□□ 1.58
SOX1-201ENST00000330949 CDH19Q9H159 772 aa24.92■■□□□ 1.58
SOX1-201ENST00000330949 GIN1Q9NXP7 522 aa24.92■■□□□ 1.58
SOX1-201ENST00000330949 CDC14AQ9UNH5 594 aa24.92■■□□□ 1.58
SOX1-201ENST00000330949 CNOT3O75175 753 aaKnown RBP24.92■■□□□ 1.58
SOX1-201ENST00000330949 C4BPAP04003 597 aaKnown RBP24.92■■□□□ 1.58
SOX1-201ENST00000330949 GLDCP23378 1020 aa24.92■■□□□ 1.58
SOX1-201ENST00000330949 ARRB2P32121 409 aa24.92■■□□□ 1.58
SOX1-201ENST00000330949 CNTN2Q02246 1040 aa24.92■■□□□ 1.58
SOX1-201ENST00000330949 NANOGNBQ7Z5D8 188 aa24.92■■□□□ 1.58
SOX1-201ENST00000330949 APOBEC3GQ9HC16 384 aaKnown RBP24.92■■□□□ 1.58
SOX1-201ENST00000330949 TCF7L2Q9NQB0 619 aa24.92■■□□□ 1.58
SOX1-201ENST00000330949 COPG2Q9UBF2 871 aa24.92■■□□□ 1.58
SOX1-201ENST00000330949 CROCCQ5TZA2 2017 aa24.92■■□□□ 1.58
SOX1-201ENST00000330949 SULT1C4O75897 302 aa24.91■■□□□ 1.58
SOX1-201ENST00000330949 ATE1O95260 518 aa24.91■■□□□ 1.58
SOX1-201ENST00000330949 CTBSQ01459 385 aa24.91■■□□□ 1.58
SOX1-201ENST00000330949 NOMO1Q15155 1222 aa24.91■■□□□ 1.58
SOX1-201ENST00000330949 ZNF518BQ9C0D4 1074 aa24.91■■□□□ 1.58
SOX1-201ENST00000330949 CYP26B1Q9NR63 512 aa24.91■■□□□ 1.58
SOX1-201ENST00000330949 SCHIP1Q9P0W5 487 aaPredicted RBP24.91■■□□□ 1.58
SOX1-201ENST00000330949 HESX1Q9UBX0 185 aa24.91■■□□□ 1.58
SOX1-201ENST00000330949 CROTQ9UKG9 612 aa24.91■■□□□ 1.58
SOX1-201ENST00000330949 PCDHB12Q9Y5F1 795 aa24.91■■□□□ 1.58
SOX1-201ENST00000330949 CNTNAP2Q9UHC6 1331 aa24.91■■□□□ 1.58
SOX1-201ENST00000330949 NRXN2Q9P2S2 1712 aa24.91■■□□□ 1.58
SOX1-201ENST00000330949 FAM155AB1AL88 458 aaPredicted RBP24.91■■□□□ 1.58
SOX1-201ENST00000330949 WDR64B1ANS9 1081 aa24.91■■□□□ 1.58
SOX1-201ENST00000330949 ITGB5P18084 799 aa24.91■■□□□ 1.58
SOX1-201ENST00000330949 PDE1CQ14123 709 aaPredicted RBP24.91■■□□□ 1.58
SOX1-201ENST00000330949 SLC9B1Q4ZJI4 515 aa24.91■■□□□ 1.58
SOX1-201ENST00000330949 DEPDC1Q5TB30 811 aa24.91■■□□□ 1.58
SOX1-201ENST00000330949 RPF2Q9H7B2 306 aaKnown RBP24.91■■□□□ 1.58
SOX1-201ENST00000330949 WDR41Q9HAD4 459 aa24.91■■□□□ 1.58
SOX1-201ENST00000330949 ACOT8O14734 319 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 OXSR1O95747 527 aaPredicted RBP24.9■■□□□ 1.58
SOX1-201ENST00000330949 SOX10P56693 466 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 LDHDQ86WU2 507 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 MYO1HQ8N1T3 1032 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 ARL10Q8N8L6 244 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 USP13Q92995 863 aaPredicted RBP24.9■■□□□ 1.58
SOX1-201ENST00000330949 CGREF1Q99674 301 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 DOK1Q99704 481 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 RSAD1Q9HA92 442 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 TRPV5Q9NQA5 729 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 SLC22A2O15244 555 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 ATXN3P54252 364 aaPredicted RBP24.9■■□□□ 1.58
SOX1-201ENST00000330949 IL23RQ5VWK5 629 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 SNRNP48Q6IEG0 339 aaKnown RBP24.9■■□□□ 1.58
SOX1-201ENST00000330949 RNF148Q8N7C7 305 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 MXRA8Q9BRK3 442 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 CALN1Q9BXU9 219 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 ATAD3AQ9NVI7 634 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 H3BMQ9 156 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 NFIBO00712 420 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 APRTP07741 180 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 ENO3P13929 434 aaPredicted RBP24.9■■□□□ 1.58
SOX1-201ENST00000330949 LYSMD3Q7Z3D4 306 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 RCN3Q96D15 328 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 COG8Q96MW5 612 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 TMEM39BQ9GZU3 492 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 SEMA6AQ9H2E6 1030 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 CXorf21Q9HAI6 301 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 GIT1Q9Y2X7 761 aa24.9■■□□□ 1.58
SOX1-201ENST00000330949 QSER1Q2KHR3 1735 aa24.89■■□□□ 1.58
SOX1-201ENST00000330949 H7C0C1 242 aa24.89■■□□□ 1.58
SOX1-201ENST00000330949 VNN1O95497 513 aa24.89■■□□□ 1.58
SOX1-201ENST00000330949 ALDOAP04075 364 aaKnown RBP24.89■■□□□ 1.58
SOX1-201ENST00000330949 P4HA1P13674 534 aa24.89■■□□□ 1.58
SOX1-201ENST00000330949 MX2P20592 715 aa24.89■■□□□ 1.58
SOX1-201ENST00000330949 PROZP22891 400 aa24.89■■□□□ 1.58
SOX1-201ENST00000330949 RFC1P35251 1148 aaPredicted RBP24.89■■□□□ 1.58
SOX1-201ENST00000330949 ATP5OP48047 213 aa24.89■■□□□ 1.58
SOX1-201ENST00000330949 RPS3AP61247 264 aaKnown RBP24.89■■□□□ 1.58
SOX1-201ENST00000330949 INSCQ1MX18 579 aa24.89■■□□□ 1.58
SOX1-201ENST00000330949 PPM1LQ5SGD2 360 aa24.89■■□□□ 1.58
SOX1-201ENST00000330949 XKR5Q6UX68 686 aa24.89■■□□□ 1.58
SOX1-201ENST00000330949 ARFGAP1Q8N6T3 406 aa24.89■■□□□ 1.58
SOX1-201ENST00000330949 EBNA1BP2Q99848 306 aaKnown RBP24.89■■□□□ 1.58
SOX1-201ENST00000330949 KCNH7Q9NS40 1196 aa24.89■■□□□ 1.58
SOX1-201ENST00000330949 COL20A1Q9P218 1284 aa24.89■■□□□ 1.58
SOX1-201ENST00000330949 RGPD3A6NKT7 1758 aaPredicted RBP24.89■■□□□ 1.57
SOX1-201ENST00000330949 RGPD4Q7Z3J3 1758 aa24.89■■□□□ 1.57
SOX1-201ENST00000330949 SPDYE2BA6NHP3 402 aa24.89■■□□□ 1.57
SOX1-201ENST00000330949 YDJCA8MPS7 323 aa24.89■■□□□ 1.57
SOX1-201ENST00000330949 TPP1O14773 563 aa24.89■■□□□ 1.57
SOX1-201ENST00000330949 SPDYE6P0CI01 402 aa24.89■■□□□ 1.57
SOX1-201ENST00000330949 SPDYE2Q495Y8 402 aa24.89■■□□□ 1.57
SOX1-201ENST00000330949 EGFLAMQ63HQ2 1017 aa24.89■■□□□ 1.57
SOX1-201ENST00000330949 FAM47BQ8NA70 645 aa24.89■■□□□ 1.57
SOX1-201ENST00000330949 TNIP2Q8NFZ5 429 aa24.89■■□□□ 1.57
SOX1-201ENST00000330949 STARD8Q92502 1023 aa24.89■■□□□ 1.57
SOX1-201ENST00000330949 LSM1O15116 133 aaKnown RBP24.88■■□□□ 1.57
SOX1-201ENST00000330949 HSPA4LO95757 839 aa24.88■■□□□ 1.57
SOX1-201ENST00000330949 NFKBIAP25963 317 aa24.88■■□□□ 1.57
SOX1-201ENST00000330949 ART3Q13508 389 aa24.88■■□□□ 1.57
SOX1-201ENST00000330949 CYP4A22Q5TCH4 519 aa24.88■■□□□ 1.57
SOX1-201ENST00000330949 RNF169Q8NCN4 708 aa24.88■■□□□ 1.57
SOX1-201ENST00000330949 CMASQ8NFW8 434 aaPredicted RBP24.88■■□□□ 1.57
SOX1-201ENST00000330949 SLC7A3Q8WY07 619 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms