RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 PSMD5Q16401 504 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 BDH2Q9BUT1 245 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 IL1RL2Q9HB29 575 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 ZNF112Q9UJU3 913 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.92□□□□□ -0.82
COL12A1-201ENST00000322507 ETV5P41161 510 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 PHC1P78364 1004 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 YME1L1Q96TA2 773 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 H3BMM5 538 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 ITGA3P26006 1051 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 MAPK7Q13164 816 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 MDH1BQ5I0G3 518 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 GARNL3Q5VVW2 1013 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 ANKRD7Q92527 254 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 VPS33AQ96AX1 596 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 TMEM237Q96Q45 408 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 SP140LQ9H930 580 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 NYAP2Q9P242 653 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 SDR42E2A6NKP2 422 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 CD2P06729 351 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 ZNF14P17017 642 aaPredicted RBP9.92□□□□□ -0.82
COL12A1-201ENST00000322507 POU1F1P28069 291 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 PTRHD1Q6GMV3 140 aaKnown RBP9.92□□□□□ -0.82
COL12A1-201ENST00000322507 JAMLQ86YT9 394 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 CEP97Q8IW35 865 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 C15orf38-AP3S2A0A0A6YYH1 394 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 MYL12AP19105 171 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 PPP2R1BP30154 601 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 MAGEA12P43365 314 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 ARHGAP15Q53QZ3 475 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 SIRT2Q8IXJ6 389 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 TMA16Q96EY4 203 aaKnown RBP9.92□□□□□ -0.82
COL12A1-201ENST00000322507 MCEEQ96PE7 176 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 MROH7Q68CQ1 1323 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 SSX4O60224 188 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 HSD3B1P14060 373 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 ZNF543Q08ER8 600 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 METTL16Q86W50 562 aaKnown RBP9.92□□□□□ -0.82
COL12A1-201ENST00000322507 EIF1ADQ8N9N8 165 aaKnown RBP9.92□□□□□ -0.82
COL12A1-201ENST00000322507 PPP1R13LQ8WUF5 828 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 ART5Q96L15 291 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 SPON2Q9BUD6 331 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 FHOD1Q9Y613 1164 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 TMEM114B3SHH9 223 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 NPM3O75607 178 aaKnown RBP9.92□□□□□ -0.82
COL12A1-201ENST00000322507 FKBP9O95302 570 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 GJA1P17302 382 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 GPD1P21695 349 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 GALCP54803 685 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 MOGSQ13724 837 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 EZH2Q15910 746 aaKnown RBP9.92□□□□□ -0.82
COL12A1-201ENST00000322507 FKBP9P1Q75LS8 142 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 EEPD1Q7L9B9 569 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 POLR3BQ9NW08 1133 aaPredicted RBP9.92□□□□□ -0.82
COL12A1-201ENST00000322507 MTMR4Q9NYA4 1195 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 PLAGL2Q9UPG8 496 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 GSG1L2A8MUP6 293 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 SUPT3HB4E1H0 165 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 BNIP3LO60238 219 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 HK2P52789 917 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 CDH4P55283 916 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 TWF1Q12792 350 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 DCAF6Q58WW2 860 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 LMBRD2Q68DH5 695 aaPredicted RBP9.92□□□□□ -0.82
COL12A1-201ENST00000322507 HAGHLQ6PII5 290 aaPredicted RBP9.92□□□□□ -0.82
COL12A1-201ENST00000322507 UCMAQ8WVF2 138 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 SPATA7Q9P0W8 599 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.92□□□□□ -0.82
COL12A1-201ENST00000322507 GSTK1Q9Y2Q3 226 aa9.92□□□□□ -0.82
COL12A1-201ENST00000322507 ADORA2BP29275 332 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 DNAJA1P31689 397 aaKnown RBP9.91□□□□□ -0.82
COL12A1-201ENST00000322507 ARL4DP49703 201 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 CHRNB3Q05901 458 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 SNAPC2Q13487 334 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 IZUMO2Q6UXV1 221 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 PALB2Q86YC2 1186 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 KSR1Q8IVT5 923 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 MAGEE2Q8TD90 523 aaPredicted RBP9.91□□□□□ -0.82
COL12A1-201ENST00000322507 ISCA1Q9BUE6 129 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 MED28Q9H204 178 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 VTI1BQ9UEU0 232 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 POLG2Q9UHN1 485 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 AK5Q9Y6K8 562 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 SPATA31A3Q5VYP0 1347 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 PREX1Q8TCU6 1659 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 ULK1O75385 1050 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 VPS26AO75436 327 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 GH1P01241 217 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 DGKDQ16760 1214 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 BARGINQ6ZT62 677 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 C16orf86Q6ZW13 317 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 NECAB2Q7Z6G3 386 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 SPATA6LQ8N4H0 392 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 OR8H1Q8NGG4 311 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.91□□□□□ -0.82
COL12A1-201ENST00000322507 MYL4P12829 197 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 SHC4Q6S5L8 630 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 GLB1LQ6UWU2 654 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 ATP6V0D2Q8N8Y2 350 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 RNF149Q8NC42 400 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms