RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 XPNPEP3Q9NQH7 507 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 FAM8A1Q9UBU6 413 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.78■□□□□ 0.28
SFXN1-201ENST00000321442 UBDO15205 165 aa16.77■□□□□ 0.28
SFXN1-201ENST00000321442 FOLH1Q04609 750 aa16.77■□□□□ 0.28
SFXN1-201ENST00000321442 TBCELQ5QJ74 424 aa16.77■□□□□ 0.28
SFXN1-201ENST00000321442 ZMAT2Q96NC0 199 aaKnown RBP16.77■□□□□ 0.28
SFXN1-201ENST00000321442 TRPC7Q9HCX4 862 aa16.77■□□□□ 0.28
SFXN1-201ENST00000321442 RPL26L1Q9UNX3 145 aaKnown RBP16.77■□□□□ 0.28
SFXN1-201ENST00000321442 APOA4P06727 396 aa16.77■□□□□ 0.28
SFXN1-201ENST00000321442 FCGRTP55899 365 aa16.77■□□□□ 0.28
SFXN1-201ENST00000321442 GSTA3Q16772 222 aa16.77■□□□□ 0.28
SFXN1-201ENST00000321442 PTPN20Q4JDL3 420 aa16.77■□□□□ 0.28
SFXN1-201ENST00000321442 PPP1R15BQ5SWA1 713 aa16.77■□□□□ 0.28
SFXN1-201ENST00000321442 CELF3Q5SZQ8 465 aaKnown RBP16.77■□□□□ 0.28
SFXN1-201ENST00000321442 UBAP2Q5T6F2 1119 aaKnown RBP16.77■□□□□ 0.28
SFXN1-201ENST00000321442 ANO7Q6IWH7 933 aa16.77■□□□□ 0.28
SFXN1-201ENST00000321442 DACH2Q96NX9 599 aa16.77■□□□□ 0.28
SFXN1-201ENST00000321442 RNF157Q96PX1 679 aa16.77■□□□□ 0.28
SFXN1-201ENST00000321442 COL18A1P39060 1754 aa16.77■□□□□ 0.27
SFXN1-201ENST00000321442 VAPBO95292 243 aa16.77■□□□□ 0.27
SFXN1-201ENST00000321442 INPP1P49441 399 aa16.77■□□□□ 0.27
SFXN1-201ENST00000321442 CPT1AP50416 773 aa16.77■□□□□ 0.27
SFXN1-201ENST00000321442 LIN52Q52LA3 116 aa16.77■□□□□ 0.27
SFXN1-201ENST00000321442 CWF19L1Q69YN2 538 aaKnown RBP16.77■□□□□ 0.27
SFXN1-201ENST00000321442 DAW1Q8N136 415 aa16.77■□□□□ 0.27
SFXN1-201ENST00000321442 WDR55Q9H6Y2 383 aaPredicted RBP16.77■□□□□ 0.27
SFXN1-201ENST00000321442 WDR41Q9HAD4 459 aa16.77■□□□□ 0.27
SFXN1-201ENST00000321442 SUPT3HB4E1H0 165 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 COX4I1P13073 169 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 YBX3P16989 372 aaKnown RBP eCLIP16.76■□□□□ 0.275e-9■□□□□ 10.5
SFXN1-201ENST00000321442 TRPC1P48995 793 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 ABCE1P61221 599 aaKnown RBP16.76■□□□□ 0.27
SFXN1-201ENST00000321442 ZNF235Q14590 738 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 CYP1B1Q16678 543 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 SGO1Q5FBB7 561 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 B3GNT6Q6ZMB0 384 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 AMIGO2Q86SJ2 522 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 ADCK1Q86TW2 530 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 C12orf50Q8NA57 414 aaPredicted RBP16.76■□□□□ 0.27
SFXN1-201ENST00000321442 GID8Q9NWU2 228 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 C1orf232A0A0U1RR37 186 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 SOWAHBA6NEL2 793 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 SPATA31C2B4DYI2 1134 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 MAN1A2O60476 641 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 SERPINA6P08185 405 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 VAV1P15498 845 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 ACADSBP45954 432 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 PRKAA1Q13131 559 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 RNASEH2BQ5TBB1 312 aaKnown RBP16.76■□□□□ 0.27
SFXN1-201ENST00000321442 DEFB128Q7Z7B8 93 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 C10orf107Q8IVU9 208 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 MFSD14AQ96MC6 490 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 NR1H4Q96RI1 486 aaPredicted RBP16.76■□□□□ 0.27
SFXN1-201ENST00000321442 WDCPQ9H6R7 721 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 BARX2Q9UMQ3 279 aaPredicted RBP16.76■□□□□ 0.27
SFXN1-201ENST00000321442 HEATR9A2RTY3 570 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 LIN7AO14910 233 aaPredicted RBP16.76■□□□□ 0.27
SFXN1-201ENST00000321442 INPP4BO15327 924 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 DDHD2O94830 711 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 RPL5P46777 297 aaKnown RBP16.76■□□□□ 0.27
SFXN1-201ENST00000321442 KCNK10P57789 538 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 DCTN2Q13561 401 aaKnown RBP16.76■□□□□ 0.27
SFXN1-201ENST00000321442 UNC5AQ6ZN44 842 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 OR52K1Q8NGK4 314 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 SLC44A1Q8WWI5 657 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 TEPSINQ96N21 525 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 LGMNQ99538 433 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 OMDQ99983 421 aa16.76■□□□□ 0.27
SFXN1-201ENST00000321442 SNRNP25Q9BV90 132 aaKnown RBP16.76■□□□□ 0.27
SFXN1-201ENST00000321442 ZNF395Q9H8N7 513 aaPredicted RBP16.76■□□□□ 0.27
SFXN1-201ENST00000321442 NCF1BA6NI72 391 aaPredicted RBP16.75■□□□□ 0.27
SFXN1-201ENST00000321442 NCF1CA8MVU1 366 aaPredicted RBP16.75■□□□□ 0.27
SFXN1-201ENST00000321442 LACTBL1A8MY62 500 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 CHADO15335 359 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 TM7SF2O76062 418 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 BAIAP3O94812 1187 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 NCF1P14598 390 aaPredicted RBP16.75■□□□□ 0.27
SFXN1-201ENST00000321442 TCF4P15884 667 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 GRIK1P39086 918 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 GDF10P55107 478 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 TSHZ1Q6ZSZ6 1077 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 MICU2Q8IYU8 434 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 NDFIP2Q9NV92 336 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 AP4S1Q9Y587 144 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 ITGB4P16144 1822 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 LRCH4O75427 683 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 FARP2O94887 1054 aaPredicted RBP16.75■□□□□ 0.27
SFXN1-201ENST00000321442 PARNO95453 639 aaKnown RBP16.75■□□□□ 0.27
SFXN1-201ENST00000321442 TSPY1Q01534 308 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 SREBF2Q12772 1141 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 LBRQ14739 615 aaKnown RBP16.75■□□□□ 0.27
SFXN1-201ENST00000321442 KCNMB4Q86W47 210 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 SAMD3Q8N6K7 520 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 C12orf29Q8N999 325 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 C10orf82Q8WW14 230 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 TSPAN17Q96FV3 270 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 MBOAT7Q96N66 472 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 PRKAG2Q9UGJ0 569 aa16.75■□□□□ 0.27
SFXN1-201ENST00000321442 RABGEF1Q9UJ41 708 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms