RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 CDH1P12830 882 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 ALDH4A1P30038 563 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 GLRBP48167 497 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 THOP1P52888 689 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 TRIM32Q13049 653 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 TAF12Q16514 161 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 SNRNP35Q16560 246 aaKnown RBP12.6□□□□□ -0.39
EBF1-201ENST00000313708 OGFRL1Q5TC84 451 aaPredicted RBP12.6□□□□□ -0.39
EBF1-201ENST00000313708 KATNAL2Q8IYT4 538 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 RASSF5Q8WWW0 418 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 PCDHB18PQ96TA0 734 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 COG4Q9H9E3 785 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 RXRBP28702 533 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 AKR1D1P51857 326 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 IL5RAQ01344 420 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 IL23RQ5VWK5 629 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 PPP1R18Q6NYC8 613 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 FRMD7Q6ZUT3 714 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 C10orf107Q8IVU9 208 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 RAB2BQ8WUD1 216 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 PIF1Q9H611 641 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 SIAEQ9HAT2 523 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 ASTN1O14525 1302 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 CNTNAP2Q9UHC6 1331 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 KRT87PA6NCN2 255 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 H0Y858 1186 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 MRASO14807 208 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 MT-CO1P00395 513 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 YWHAHQ04917 246 aaPredicted RBP12.6□□□□□ -0.39
EBF1-201ENST00000313708 FOXD4Q12950 439 aaPredicted RBP12.6□□□□□ -0.39
EBF1-201ENST00000313708 ECM1Q16610 540 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 RAB44Q7Z6P3 723 aaPredicted RBP12.6□□□□□ -0.39
EBF1-201ENST00000313708 TTC39CQ8N584 583 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 SEMA4DQ92854 862 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 MTMR9Q96QG7 549 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 NXF1Q9UBU9 619 aaKnown RBP12.6□□□□□ -0.39
EBF1-201ENST00000313708 A6NL46 340 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 TPP1O14773 563 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 LDLRP01130 860 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 CSF1RP07333 972 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 CKMT2P17540 419 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 EML3Q32P44 896 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 SPANXN2Q5MJ10 180 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 CYP4A22Q5TCH4 519 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 SLFN13Q68D06 897 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 PRR23BQ6ZRT6 265 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 ASCC1Q8N9N2 400 aaKnown RBP12.6□□□□□ -0.39
EBF1-201ENST00000313708 APPL2Q8NEU8 664 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 TRUB1Q8WWH5 349 aaKnown RBP12.6□□□□□ -0.39
EBF1-201ENST00000313708 VPS33BQ9H267 617 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 TUFT1Q9NNX1 390 aa12.6□□□□□ -0.39
EBF1-201ENST00000313708 EXOSC4Q9NPD3 245 aaKnown RBP12.6□□□□□ -0.39
EBF1-201ENST00000313708 TFECO14948 347 aaPredicted RBP12.59□□□□□ -0.39
EBF1-201ENST00000313708 ATP6V1B2P21281 511 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 IDH3AP50213 366 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 HERC3Q15034 1050 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 SAMD4BQ5PRF9 694 aaKnown RBP12.59□□□□□ -0.39
EBF1-201ENST00000313708 STK32CQ86UX6 486 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 GPR180Q86V85 440 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 BEST2Q8NFU1 509 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 ADI1Q9BV57 179 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 WDR11Q9BZH6 1224 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 UNKQ9C0B0 810 aaKnown RBP12.59□□□□□ -0.39
EBF1-201ENST00000313708 GBA3Q9H227 469 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 WDR55Q9H6Y2 383 aaPredicted RBP12.59□□□□□ -0.39
EBF1-201ENST00000313708 TRMT13Q9NUP7 481 aaKnown RBP12.59□□□□□ -0.39
EBF1-201ENST00000313708 ASNSD1Q9NWL6 643 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 NR5A2O00482 541 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 APOL1O14791 398 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 NOS1APO75052 506 aaPredicted RBP12.59□□□□□ -0.39
EBF1-201ENST00000313708 AVILO75366 819 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 SPRP35270 261 aaPredicted RBP12.59□□□□□ -0.39
EBF1-201ENST00000313708 NDST2P52849 883 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 GRM2Q14416 872 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 IMPG1Q17R60 797 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 HAUS6Q7Z4H7 955 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 ANKS1BQ7Z6G8 1248 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 ARMC8Q8IUR7 673 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 C8orf59Q8N0T1 100 aaPredicted RBP12.59□□□□□ -0.39
EBF1-201ENST00000313708 OR7G1Q8NGA0 311 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 EPS8L2Q9H6S3 715 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 CCDC78A2IDD5 438 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 TNFRSF10AO00220 468 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 TBX1O43435 398 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 TMCC2O75069 709 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 TAS2R40P59535 323 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 FASTKQ14296 549 aaKnown RBP12.59□□□□□ -0.39
EBF1-201ENST00000313708 SF3B4Q15427 424 aaKnown RBP eCLIP12.59□□□□□ -0.39
EBF1-201ENST00000313708 CDKL3Q8IVW4 592 aaPredicted RBP12.59□□□□□ -0.39
EBF1-201ENST00000313708 LILRB4Q8NHJ6 448 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 FAR1Q8WVX9 515 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 SLC44A1Q8WWI5 657 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 SH2D3AQ9BRG2 576 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 CCDC106Q9BWC9 280 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 ACAT2Q9BWD1 397 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 EML4Q9HC35 981 aaKnown RBP12.59□□□□□ -0.39
EBF1-201ENST00000313708 ERGIC3Q9Y282 383 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 AQP9O43315 295 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 AOC1P19801 751 aa12.59□□□□□ -0.39
EBF1-201ENST00000313708 PRELPP51888 382 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms