RNA–Protein interactions for RNA: ENST00000312988.8

TUBA3E-201, Transcript of tubulin alpha 3e, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3E, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3E-201ENST00000312988 IRAK1P51617 712 aa16.2■□□□□ 0.18
TUBA3E-201ENST00000312988 ZNF135P52742 658 aaPredicted RBP16.2■□□□□ 0.18
TUBA3E-201ENST00000312988 PFKPQ01813 784 aa16.2■□□□□ 0.18
TUBA3E-201ENST00000312988 SEMA3BQ13214 749 aa16.2■□□□□ 0.18
TUBA3E-201ENST00000312988 DPYSL3Q14195 570 aa16.2■□□□□ 0.18
TUBA3E-201ENST00000312988 MANEALQ5VSG8 457 aa16.2■□□□□ 0.18
TUBA3E-201ENST00000312988 RFX8Q6ZV50 586 aa16.2■□□□□ 0.18
TUBA3E-201ENST00000312988 TFAP2DQ7Z6R9 452 aa16.2■□□□□ 0.18
TUBA3E-201ENST00000312988 ZNF683Q8IZ20 524 aa16.2■□□□□ 0.18
TUBA3E-201ENST00000312988 GJD3Q8N144 294 aa16.2■□□□□ 0.18
TUBA3E-201ENST00000312988 CARNMT1Q8N4J0 409 aa16.2■□□□□ 0.18
TUBA3E-201ENST00000312988 UBE2Q2Q8WVN8 375 aa16.2■□□□□ 0.18
TUBA3E-201ENST00000312988 HES6Q96HZ4 224 aa16.2■□□□□ 0.18
TUBA3E-201ENST00000312988 CATSPERBQ9H7T0 1116 aa16.2■□□□□ 0.18
TUBA3E-201ENST00000312988 CWC15Q9P013 229 aaKnown RBP16.2■□□□□ 0.18
TUBA3E-201ENST00000312988 MARK1Q9P0L2 795 aa16.2■□□□□ 0.18
TUBA3E-201ENST00000312988 PPARGC1AQ9UBK2 798 aaKnown RBP16.2■□□□□ 0.18
TUBA3E-201ENST00000312988 SORCS3Q9UPU3 1222 aa16.2■□□□□ 0.18
TUBA3E-201ENST00000312988 JRKLQ9Y4A0 524 aa16.2■□□□□ 0.18
TUBA3E-201ENST00000312988 MYOFQ9NZM1 2061 aa16.2■□□□□ 0.18
TUBA3E-201ENST00000312988 DRGXA6NNA5 263 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 H0Y626 953 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 GFRA2O00451 464 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 DDX3YO15523 660 aaKnown RBP16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 CNTN5O94779 1100 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 SRFP11831 508 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 TYRP14679 529 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 CETN2P41208 172 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 ARSEP51690 589 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 MMRN1Q13201 1228 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 CDH18Q13634 790 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 FYB2Q5VWT5 728 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 RNF135Q8IUD6 432 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 RCOR2Q8IZ40 523 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 NAT16Q8N8M0 369 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 EXD1Q8NHP7 514 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 ALG3Q92685 438 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 DNASE1L2Q92874 299 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 NECAB3Q96P71 396 aaPredicted RBP16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 CSPG4P5Q96PW8 444 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 XPO6Q96QU8 1125 aaKnown RBP16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 ZNF670Q9BS34 389 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 MAK16Q9BXY0 300 aaKnown RBP16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 RCOR3Q9P2K3 495 aaPredicted RBP16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 COL6A3P12111 3177 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 IGLV3-10A0A075B6K4 115 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 A0A1B0GVM2 712 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 TCAF2A6NFQ2 919 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 OTOL1A6NHN0 477 aaPredicted RBP16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 ARNTLO00327 626 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 FGF10O15520 208 aaPredicted RBP16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 HOXC11O43248 304 aaPredicted RBP16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 PENKP01210 267 aaPredicted RBP16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 RHOQP17081 205 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 HOXD9P28356 352 aaPredicted RBP16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 PEX5P50542 639 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 CDH4P55283 916 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 ZNF211Q13398 564 aaPredicted RBP16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 C5orf22Q49AR2 442 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 ALFQ53S48 1182 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 MPP7Q5T2T1 576 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 SPOCD1Q6ZMY3 1216 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 MFN1Q8IWA4 741 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 C16orf45Q96MC5 204 aaPredicted RBP16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 WDR24Q96S15 920 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 PSMB7Q99436 277 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 TLR10Q9BXR5 811 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 DUSP12Q9UNI6 340 aa16.19■□□□□ 0.18
TUBA3E-201ENST00000312988 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.18■□□□□ 0.18
TUBA3E-201ENST00000312988 KCNK3O14649 394 aa16.18■□□□□ 0.18
TUBA3E-201ENST00000312988 CLDN11O75508 207 aa16.18■□□□□ 0.18
TUBA3E-201ENST00000312988 LUC7L3O95232 432 aaKnown RBP16.18■□□□□ 0.18
TUBA3E-201ENST00000312988 AMPD1P23109 780 aa16.18■□□□□ 0.18
TUBA3E-201ENST00000312988 HCAR3P49019 387 aa16.18■□□□□ 0.18
TUBA3E-201ENST00000312988 AMPD2Q01433 879 aa16.18■□□□□ 0.18
TUBA3E-201ENST00000312988 ZNF177Q13360 481 aaPredicted RBP16.18■□□□□ 0.18
TUBA3E-201ENST00000312988 LLGL1Q15334 1064 aa16.18■□□□□ 0.18
TUBA3E-201ENST00000312988 ANKRD20A8PQ5CZ79 823 aa16.18■□□□□ 0.18
TUBA3E-201ENST00000312988 SEL1L2Q5TEA6 688 aa16.18■□□□□ 0.18
TUBA3E-201ENST00000312988 KAZNQ674X7 775 aa16.18■□□□□ 0.18
TUBA3E-201ENST00000312988 MFSD7Q6UXD7 560 aa16.18■□□□□ 0.18
TUBA3E-201ENST00000312988 CHST9Q7L1S5 443 aa16.18■□□□□ 0.18
TUBA3E-201ENST00000312988 RFX6Q8HWS3 928 aa16.18■□□□□ 0.18
TUBA3E-201ENST00000312988 FAM71BQ8TC56 605 aa16.18■□□□□ 0.18
TUBA3E-201ENST00000312988 TSC1Q92574 1164 aa16.18■□□□□ 0.18
TUBA3E-201ENST00000312988 SLC2A4RGQ9NR83 387 aa16.18■□□□□ 0.18
TUBA3E-201ENST00000312988 DNAJC17Q9NVM6 304 aaKnown RBP16.18■□□□□ 0.18
TUBA3E-201ENST00000312988 TICRRQ7Z2Z1 1910 aa16.18■□□□□ 0.18
TUBA3E-201ENST00000312988 CTAGE9A4FU28 777 aa16.17■□□□□ 0.18
TUBA3E-201ENST00000312988 C3orf70A6NLC5 250 aaPredicted RBP16.17■□□□□ 0.18
TUBA3E-201ENST00000312988 ATP1A1P05023 1023 aaKnown RBP16.17■□□□□ 0.18
TUBA3E-201ENST00000312988 PYGMP11217 842 aa16.17■□□□□ 0.18
TUBA3E-201ENST00000312988 ERCC2P18074 760 aa16.17■□□□□ 0.18
TUBA3E-201ENST00000312988 OR1E1P30953 314 aa16.17■□□□□ 0.18
TUBA3E-201ENST00000312988 HOXC13P31276 330 aa16.17■□□□□ 0.18
TUBA3E-201ENST00000312988 GJA4P35212 333 aa16.17■□□□□ 0.18
TUBA3E-201ENST00000312988 SOX9P48436 509 aa16.17■□□□□ 0.18
TUBA3E-201ENST00000312988 RTL3Q8N8U3 475 aaKnown RBP16.17■□□□□ 0.18
TUBA3E-201ENST00000312988 P2RY11Q96G91 374 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms