RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 ACO2Q99798 780 aaKnown RBP9.51□□□□□ -0.89
XCR1-201ENST00000309285 TRNAU1APQ9NX07 287 aaKnown RBP9.51□□□□□ -0.89
XCR1-201ENST00000309285 CARD8Q9Y2G2 431 aa9.51□□□□□ -0.89
XCR1-201ENST00000309285 MROH7Q68CQ1 1323 aa9.51□□□□□ -0.89
XCR1-201ENST00000309285 MEI4A8MW99 385 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 BIRC5O15392 142 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 RUNX1T1Q06455 604 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 MAMLD1Q13495 774 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 TSC22D1Q15714 1073 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 WLSQ5T9L3 541 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 MREGQ8N565 214 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 EIF1ADQ8N9N8 165 aaKnown RBP9.5□□□□□ -0.89
XCR1-201ENST00000309285 VCPIP1Q96JH7 1222 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 L3MBTL3Q96JM7 780 aaPredicted RBP9.5□□□□□ -0.89
XCR1-201ENST00000309285 GLT1D1Q96MS3 346 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 RAB6BQ9NRW1 208 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.5□□□□□ -0.89
XCR1-201ENST00000309285 TAGLN3Q9UI15 199 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 ZNF112Q9UJU3 913 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 PRPF4O43172 522 aaKnown RBP eCLIP9.5□□□□□ -0.89
XCR1-201ENST00000309285 MGRN1O60291 552 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 ALDH1A1P00352 501 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 RBP3P10745 1247 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 NOMO3P69849 1222 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 PTPN11Q06124 597 aaPredicted RBP9.5□□□□□ -0.89
XCR1-201ENST00000309285 NR1D2Q14995 579 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 PDK3Q15120 406 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 LIN52Q52LA3 116 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 MFSD7Q6UXD7 560 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 CDKL3Q8IVW4 592 aaPredicted RBP9.5□□□□□ -0.89
XCR1-201ENST00000309285 DCUN1D1Q96GG9 259 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 OLFM1Q99784 485 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 SETD4Q9NVD3 440 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 DPP3Q9NY33 737 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 PCDHGB4Q9UN71 923 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 SRRM3A6NNA2 597 aaPredicted RBP9.5□□□□□ -0.89
XCR1-201ENST00000309285 GRIN3BO60391 1043 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 C4BPAP04003 597 aaKnown RBP9.5□□□□□ -0.89
XCR1-201ENST00000309285 ICAM3P32942 547 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 ARL2P36404 184 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 AQP5P55064 265 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 PPIL2Q13356 520 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 PAN2Q504Q3 1202 aaKnown RBP9.5□□□□□ -0.89
XCR1-201ENST00000309285 CCDC157Q569K6 752 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 DUPD1Q68J44 220 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 NUDT18Q6ZVK8 323 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 GPR20Q99678 358 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 YIPF2Q9BWQ6 316 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 RUBCNLQ9H714 662 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 EXOSC4Q9NPD3 245 aaKnown RBP9.5□□□□□ -0.89
XCR1-201ENST00000309285 HPS4Q9NQG7 708 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.5□□□□□ -0.89
XCR1-201ENST00000309285 LACTBL1A8MY62 500 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 FCHO1O14526 889 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 APOL1O14791 398 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 KLHL41O60662 606 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 LSM8O95777 96 aaKnown RBP9.5□□□□□ -0.89
XCR1-201ENST00000309285 ASS1P00966 412 aaKnown RBP9.5□□□□□ -0.89
XCR1-201ENST00000309285 LGALS2P05162 132 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 BFSP2Q13515 415 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 KYAT1Q16773 422 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 DCAF6Q58WW2 860 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 C6orf10Q5SRN2 563 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 DEFB107AQ8IZN7 70 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 TAGAPQ8N103 731 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 TTC39CQ8N584 583 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 MAB21L3Q8N8X9 362 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 ZNF555Q8NEP9 628 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 SPATA18Q8TC71 538 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 DIS3LQ8TF46 1054 aaKnown RBP9.5□□□□□ -0.89
XCR1-201ENST00000309285 ZNF516Q92618 1163 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 TMEM121Q9BTD3 319 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 ZNF518BQ9C0D4 1074 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 RNF19AQ9NV58 838 aa9.5□□□□□ -0.89
XCR1-201ENST00000309285 MAP3K6O95382 1288 aa9.49□□□□□ -0.89
XCR1-201ENST00000309285 ATN1P54259 1190 aaPredicted RBP9.49□□□□□ -0.89
XCR1-201ENST00000309285 CCNG2Q16589 344 aa9.49□□□□□ -0.89
XCR1-201ENST00000309285 GSTA3Q16772 222 aa9.49□□□□□ -0.89
XCR1-201ENST00000309285 THOC7Q6I9Y2 204 aaKnown RBP9.49□□□□□ -0.89
XCR1-201ENST00000309285 RRM2BQ7LG56 351 aa9.49□□□□□ -0.89
XCR1-201ENST00000309285 ACOT1Q86TX2 421 aa9.49□□□□□ -0.89
XCR1-201ENST00000309285 HPS1Q92902 700 aa9.49□□□□□ -0.89
XCR1-201ENST00000309285 DGCR14Q96DF8 476 aaKnown RBP9.49□□□□□ -0.89
XCR1-201ENST00000309285 NIFKQ9BYG3 293 aaKnown RBP9.49□□□□□ -0.89
XCR1-201ENST00000309285 LSM7Q9UK45 103 aaKnown RBP9.49□□□□□ -0.89
XCR1-201ENST00000309285 NAALADL1Q9UQQ1 740 aa9.49□□□□□ -0.89
XCR1-201ENST00000309285 C3orf70A6NLC5 250 aaPredicted RBP9.49□□□□□ -0.89
XCR1-201ENST00000309285 RGS5O15539 181 aa9.49□□□□□ -0.89
XCR1-201ENST00000309285 SEMA3DO95025 777 aa9.49□□□□□ -0.89
XCR1-201ENST00000309285 ALBP02768 609 aa9.49□□□□□ -0.89
XCR1-201ENST00000309285 IMPDH2P12268 514 aa9.49□□□□□ -0.89
XCR1-201ENST00000309285 ETFBP38117 255 aa9.49□□□□□ -0.89
XCR1-201ENST00000309285 SCN9AQ15858 1988 aa9.49□□□□□ -0.89
XCR1-201ENST00000309285 TFDP3Q5H9I0 405 aa9.49□□□□□ -0.89
XCR1-201ENST00000309285 DCLK3Q9C098 648 aa9.49□□□□□ -0.89
XCR1-201ENST00000309285 MUC3BQ9H195 1237 aa9.49□□□□□ -0.89
XCR1-201ENST00000309285 CDT1Q9H211 546 aa9.49□□□□□ -0.89
XCR1-201ENST00000309285 FANCEQ9HB96 536 aa9.49□□□□□ -0.89
XCR1-201ENST00000309285 ARHGEF3Q9NR81 526 aa9.49□□□□□ -0.89
XCR1-201ENST00000309285 CLCA2Q9UQC9 943 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms