RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 PRG3Q9Y2Y8 225 aaPredicted RBP11.19□□□□□ -0.62
LSM3-201ENST00000306024 PDE4DIPQ5VU43 2346 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 CASTOR2A6NHX0 329 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 MED7O43513 233 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 SGPL1O95470 568 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 PROCP04070 461 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 KRT1P04264 644 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 PSMC3P17980 439 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 SSTR1P30872 391 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 FDFT1P37268 417 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 HALP42357 657 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 CD151P48509 253 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 C21orf59P57076 290 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 ORC1Q13415 861 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 SLC10A6Q3KNW5 377 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 THOC7Q6I9Y2 204 aaKnown RBP11.19□□□□□ -0.62
LSM3-201ENST00000306024 AAGABQ6PD74 315 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 PDSS2Q86YH6 399 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 CPNE8Q86YQ8 564 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 CLVS1Q8IUQ0 354 aaPredicted RBP11.19□□□□□ -0.62
LSM3-201ENST00000306024 CXorf38Q8TB03 319 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 FNDC8Q8TC99 324 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 FAM172AQ8WUF8 416 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 TMEM40Q8WWA1 233 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 RSPH1Q8WYR4 309 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 AZIN2Q96A70 460 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 PPWD1Q96BP3 646 aaKnown RBP11.19□□□□□ -0.62
LSM3-201ENST00000306024 ADAMTS10Q9H324 1103 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 RSAD1Q9HA92 442 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 TRNAU1APQ9NX07 287 aaKnown RBP11.19□□□□□ -0.62
LSM3-201ENST00000306024 STYXL1Q9Y6J8 313 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 PEX1O43933 1283 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 EDN1P05305 212 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 RAP1GAPP47736 663 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 TAF6P49848 677 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 CDH8P55286 799 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 TLE2Q04725 743 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 SULT2A1Q06520 285 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 TNFAIP8L3Q5GJ75 292 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 ZBTB46Q86UZ6 589 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 DEFB107AQ8IZN7 70 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 EME1Q96AY2 570 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 VPS50Q96JG6 964 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 ZFP42Q96MM3 310 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 LIN28AQ9H9Z2 209 aaKnown RBP11.19□□□□□ -0.62
LSM3-201ENST00000306024 PPCSQ9HAB8 311 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 GID8Q9NWU2 228 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 PCDHB7Q9Y5E2 793 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 AP4B1Q9Y6B7 739 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 B4GALT4O60513 344 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 GMNNO75496 209 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 CST3P01034 146 aaPredicted RBP11.18□□□□□ -0.62
LSM3-201ENST00000306024 HSPA1AP0DMV8 641 aaKnown RBP11.18□□□□□ -0.62
LSM3-201ENST00000306024 HSPA1BP0DMV9 641 aaKnown RBP11.18□□□□□ -0.62
LSM3-201ENST00000306024 SELPP16109 830 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 SCNN1GP51170 649 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 TRIM16LQ309B1 348 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 FBXO46Q6PJ61 603 aaPredicted RBP11.18□□□□□ -0.62
LSM3-201ENST00000306024 PACS1Q6VY07 963 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 LRRC8DQ7L1W4 858 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 COX4I2Q96KJ9 171 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 KCNK16Q96T55 309 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 NACA2Q9H009 215 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 CISHQ9NSE2 258 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 ITGA11Q9UKX5 1188 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 POLIQ9UNA4 740 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 TMED5Q9Y3A6 229 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 PRR5-ARHGAP8B1AHC4 643 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 BHMG1C9JSJ3 638 aaPredicted RBP11.18□□□□□ -0.62
LSM3-201ENST00000306024 H3BSA7 217 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 GPR32O75388 356 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 TCEA3O75764 348 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 KRT37O76014 449 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 C4BPAP04003 597 aaKnown RBP11.18□□□□□ -0.62
LSM3-201ENST00000306024 PORP16435 677 aaPredicted RBP11.18□□□□□ -0.62
LSM3-201ENST00000306024 OR1G1P47890 313 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 ARHGAP8P85298 464 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 GCNT1Q02742 428 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 CENPCQ03188 943 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 PDCD4Q53EL6 469 aaKnown RBP11.18□□□□□ -0.62
LSM3-201ENST00000306024 SPDYAQ5MJ70 313 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 AMIGO2Q86SJ2 522 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 SLC47A2Q86VL8 602 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 TMEM35BQ8NCS4 154 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 KLHDC9Q8NEP7 349 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 APPL2Q8NEU8 664 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 CFAP36Q96G28 342 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 C11orf70Q9BRQ4 267 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 ZBED2Q9BTP6 218 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 KLHL25Q9H0H3 589 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 PLEKHA5Q9HAU0 1116 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 PALMDQ9NP74 551 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 ACP6Q9NPH0 428 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 PACSIN3Q9UKS6 424 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 ABHD2P08910 425 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 ZSCAN5DPP0CG00 497 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 CDH3P22223 829 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 HMOX2P30519 316 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 SLC1A1P43005 524 aa11.18□□□□□ -0.62
LSM3-201ENST00000306024 CD97P48960 835 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms