RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.8□□□□□ -1.16
SF3B3-201ENST00000302516 BHLHE22Q8NFJ8 381 aaPredicted RBP7.8□□□□□ -1.16
SF3B3-201ENST00000302516 ACTL9Q8TC94 416 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 CKAP2Q8WWK9 683 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 GORASP1Q9BQQ3 440 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 PCDHA11Q9Y5I1 949 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 GMEB1Q9Y692 573 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 PARP4Q9UKK3 1724 aaKnown RBP7.8□□□□□ -1.16
SF3B3-201ENST00000302516 WWP2O00308 870 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 HS6ST1O60243 411 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 GSTM1P09488 218 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 TSPAN19P0C672 248 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 CENPAP49450 140 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 ACLYP53396 1101 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 TNK2Q07912 1038 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 BAATQ14032 418 aaPredicted RBP7.8□□□□□ -1.16
SF3B3-201ENST00000302516 RINLQ6ZS11 566 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 USP49Q70CQ1 688 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 CACTIN-AS1Q8N1I8 211 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 HTR3CQ8WXA8 447 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 TMEM176AQ96HP8 235 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 LRMDAQ9H2I8 198 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 PCDHB7Q9Y5E2 793 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 EPN2O95208 641 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 DRG2P55039 364 aaKnown RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 NEDD8Q15843 81 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 INTS11Q5TA45 600 aaKnown RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 LRRC38Q5VT99 294 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 CREG2Q8IUH2 290 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 FAM81AQ8TBF8 368 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 PROX1Q92786 737 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 DPY30Q9C005 99 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 PAIP1Q9H074 479 aaKnown RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 PADI4Q9UM07 663 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 C2CD2Q9Y426 696 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 FAM208AQ9UK61 1670 aaKnown RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 FGF10O15520 208 aaPredicted RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 C21orf2O43822 256 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 FYNP06241 537 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 PECAM1P16284 738 aaPredicted RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 ITGA2P17301 1181 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 BCAP31P51572 246 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 CACNB2Q08289 660 aaPredicted RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 ZNF846Q147U1 533 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 DGKKQ5KSL6 1271 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 PDPRQ8NCN5 879 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 LACRTQ9GZZ8 138 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 FBXO44Q9H4M3 255 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 REEP1Q9H902 201 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 WDR41Q9HAD4 459 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 ARHGAP20Q9P2F6 1191 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 PRPF19Q9UMS4 504 aaKnown RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 SYNPO2Q9UMS6 1093 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 KBTBD13C9JR72 458 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 MRASO14807 208 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 TSC22D2O75157 780 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 PAICSP22234 425 aaKnown RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 GPC1P35052 558 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 ELK3P41970 407 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 CDC42P60953 191 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 PTPN11Q06124 597 aaPredicted RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 DDR1Q08345 913 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 PARP6Q2NL67 630 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 NUDT12Q9BQG2 462 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 FICDQ9BVA6 458 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 NLNQ9BYT8 704 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 GRIP2Q9C0E4 1043 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 SEMA4AQ9H3S1 761 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 POLD4Q9HCU8 107 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 ARHGAP28Q9P2N2 729 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 COL3A1P02461 1466 aaPredicted RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 AKAP12Q02952 1782 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 AKAP5P24588 427 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 ADSSP30520 456 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 NPTX2P47972 431 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 TOB1P50616 345 aaPredicted RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 SMIM11AP58511 58 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 RPL10AP62906 217 aaKnown RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 TTC23Q5W5X9 447 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 STYK1Q6J9G0 422 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 UBA3Q8TBC4 463 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 FAM151AQ8WW52 585 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 BSNDQ8WZ55 320 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 PTCD3Q96EY7 689 aaKnown RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 RAD18Q9NS91 495 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 TAS2R13Q9NYV9 303 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 TAF4O00268 1085 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 GLRBP48167 497 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 GRIK3Q13003 919 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 RRP1BQ14684 758 aaKnown RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 AAGABQ6PD74 315 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 C16orf62Q7Z3J2 963 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 C10orf53Q8N6V4 93 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 FNDC5Q8NAU1 212 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 TLR10Q9BXR5 811 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 CISHQ9NSE2 258 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 MORF4L1Q9UBU8 362 aa7.79□□□□□ -1.16
SF3B3-201ENST00000302516 DMGDHQ9UI17 866 aaKnown RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 ARIH1Q9Y4X5 557 aaPredicted RBP7.79□□□□□ -1.16
SF3B3-201ENST00000302516 MTRF1O75570 445 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms