RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 ZNF839A8K0R7 811 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 IPO5O00410 1097 aaKnown RBP14.78□□□□□ -0.04
CDT1-201ENST00000301019 NOL3O60936 208 aaKnown RBP14.78□□□□□ -0.04
CDT1-201ENST00000301019 APOEP02649 317 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 GAP43P17677 238 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 GRK2P25098 689 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 RAD23AP54725 363 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 XIAPP98170 497 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 PIGFQ07326 219 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 CDO1Q16878 200 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 DEPDC1Q5TB30 811 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 PADI6Q6TGC4 694 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 LYSMD3Q7Z3D4 306 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 KATNAL2Q8IYT4 538 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 NAP1L4Q99733 375 aaKnown RBP14.78□□□□□ -0.04
CDT1-201ENST00000301019 SNX25Q9H3E2 840 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 PI4KBQ9UBF8 816 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 HES2Q9Y543 173 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 RNF103-CHMP3A0A140T963 221 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 H3BNH8 94 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 UNGP13051 313 aaPredicted RBP14.77□□□□□ -0.04
CDT1-201ENST00000301019 EEF1DP29692 281 aaKnown RBP14.77□□□□□ -0.04
CDT1-201ENST00000301019 SLC18A2Q05940 514 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 KRT39Q6A163 491 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 SH2D5Q6ZV89 423 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 FBXL13Q8NEE6 735 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 KLC2Q9H0B6 622 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 C9JVG2 144 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 BIRC5O15392 142 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 CHRNGP07510 517 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 GNA15P30679 374 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 RAB39AQ14964 217 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 PHKG1Q16816 387 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 CCDC153Q494R4 210 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 RAB6CQ53S08 254 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 TFDP3Q5H9I0 405 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 SCARA5Q6ZMJ2 495 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 STXBP4Q6ZWJ1 553 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 CEP41Q9BYV8 373 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 FRMD8Q9BZ67 464 aaPredicted RBP14.77□□□□□ -0.04
CDT1-201ENST00000301019 RAB6CQ9H0N0 254 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 CDH19Q9H159 772 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 VTA1Q9NP79 307 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 SIRPGQ9P1W8 387 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 FARP1Q9Y4F1 1045 aaPredicted RBP14.77□□□□□ -0.04
CDT1-201ENST00000301019 NUB1Q9Y5A7 615 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 ROBO3Q96MS0 1386 aa14.77□□□□□ -0.04
CDT1-201ENST00000301019 hCG_1818297A0A087WSY0 165 aa14.77□□□□□ -0.05
CDT1-201ENST00000301019 PIM1P11309 404 aaPredicted RBP14.77□□□□□ -0.05
CDT1-201ENST00000301019 GABRB3P28472 473 aa14.77□□□□□ -0.05
CDT1-201ENST00000301019 ARPP19P56211 112 aa14.77□□□□□ -0.05
CDT1-201ENST00000301019 IKBKEQ14164 716 aa14.77□□□□□ -0.05
CDT1-201ENST00000301019 C16orf86Q6ZW13 317 aa14.77□□□□□ -0.05
CDT1-201ENST00000301019 SGCDQ92629 289 aa14.77□□□□□ -0.05
CDT1-201ENST00000301019 DGCR6LQ9BY27 220 aa14.77□□□□□ -0.05
CDT1-201ENST00000301019 DHX35Q9H5Z1 703 aaKnown RBP14.77□□□□□ -0.05
CDT1-201ENST00000301019 CLK4Q9HAZ1 481 aaKnown RBP14.77□□□□□ -0.05
CDT1-201ENST00000301019 C1orf112Q9NSG2 853 aa14.77□□□□□ -0.05
CDT1-201ENST00000301019 SLC9A2Q9UBY0 812 aa14.77□□□□□ -0.05
CDT1-201ENST00000301019 RABL2BQ9UNT1 228 aa14.77□□□□□ -0.05
CDT1-201ENST00000301019 MYO18AQ92614 2054 aaKnown RBP14.76□□□□□ -0.05
CDT1-201ENST00000301019 SOCS2O14508 198 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 GABBR2O75899 941 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 MYCLP1P12525 358 aaPredicted RBP14.76□□□□□ -0.05
CDT1-201ENST00000301019 ZNF26P17031 533 aaPredicted RBP14.76□□□□□ -0.05
CDT1-201ENST00000301019 ACOT2P49753 483 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 NME5P56597 212 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 WASHC5Q12768 1159 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 DPYSL3Q14195 570 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 INAQ16352 499 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 ASPRV1Q53RT3 343 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 PLA2G4FQ68DD2 849 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 USP43Q70EL4 1123 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 HAUS6Q7Z4H7 955 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 CHERPQ8IWX8 916 aaKnown RBP14.76□□□□□ -0.05
CDT1-201ENST00000301019 SIX6OS1Q8N1H7 587 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 KYQ8NBH2 561 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 FAR2Q96K12 515 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 WDR41Q9HAD4 459 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 KLRG2A4D1S0 409 aaPredicted RBP14.76□□□□□ -0.05
CDT1-201ENST00000301019 ANKRD34BA5PLL1 514 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 TPP1O14773 563 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 ZNF252P-AS1Q0IIN9 211 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 SLC13A2Q13183 592 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 ZIK1Q3SY52 487 aaPredicted RBP14.76□□□□□ -0.05
CDT1-201ENST00000301019 BRDTQ58F21 947 aaPredicted RBP14.76□□□□□ -0.05
CDT1-201ENST00000301019 ANKRD26P1Q6NSI1 321 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 TAS2R42Q7RTR8 314 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 FEZF2Q8TBJ5 459 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 DHRS4Q9BTZ2 278 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 WDR18Q9BV38 432 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 STK39Q9UEW8 545 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 VAV3Q9UKW4 847 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 ITGA11Q9UKX5 1188 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 BOLA1Q9Y3E2 137 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 ARAP2Q8WZ64 1704 aa14.76□□□□□ -0.05
CDT1-201ENST00000301019 FAM47E-STBD1D6RA91 191 aa14.75□□□□□ -0.05
CDT1-201ENST00000301019 PSTPIP1O43586 416 aa14.75□□□□□ -0.05
CDT1-201ENST00000301019 PIK3R1P27986 724 aa14.75□□□□□ -0.05
CDT1-201ENST00000301019 NEK2P51955 445 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms