RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 AP3S1Q92572 193 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 SLITRK1Q96PX8 696 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 AKAP7Q9P0M2 348 aaPredicted RBP5.67□□□□□ -1.5
CPSF2-201ENST00000298875 TRPC4Q9UBN4 977 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 VPS28Q9UK41 221 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 A0A0G2JPF8 293 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 HNRNPCL3B7ZW38 293 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 HNRNPCL4P0DMR1 293 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 CKBP12277 381 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 PNPLA4P41247 253 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 RHOAP61586 193 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 NRF1Q16656 503 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 SYCE2Q6PIF2 218 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 GPATCH2LQ9NWQ4 482 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 TPRKBQ9Y3C4 175 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 A0A087X0T9 212 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 LOC100506127A0A0U1RQW1 187 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 WDR27A2RRH5 827 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 TTLL13PA6NNM8 815 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 PSMD11O00231 422 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 PCSK2P16519 638 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 PTGS2P35354 604 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 ACLYP53396 1101 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 NECAB2Q7Z6G3 386 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 KYQ8NBH2 561 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 DCLK3Q9C098 648 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 MUC13Q9H3R2 512 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 RICTORQ6R327 1708 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 C15orf38-AP3S2A0A0A6YYH1 394 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 SLC15A2Q16348 729 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 ARPINQ7Z6K5 226 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 CCNJLQ8IV13 435 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 TMEM132CQ8N3T6 1108 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 ATXN2LQ8WWM7 1075 aaKnown RBP5.67□□□□□ -1.5
CPSF2-201ENST00000298875 NEDD4LQ96PU5 975 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 KCNH7Q9NS40 1196 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 SIK3Q9Y2K2 1263 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 ERI2A8K979 691 aaKnown RBP5.67□□□□□ -1.5
CPSF2-201ENST00000298875 SEC22BO75396 215 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 TNFRSF21O75509 655 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 STIP1P31948 543 aaKnown RBP5.67□□□□□ -1.5
CPSF2-201ENST00000298875 ARF5P84085 180 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 ADGRF2Q8IZF7 708 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 MARK4Q96L34 752 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 TSPAN18Q96SJ8 248 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 EMILIN2Q9BXX0 1053 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 UGT2B28Q9BY64 529 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 LRRC40Q9H9A6 602 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 GPAMQ9HCL2 828 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 NARFQ9UHQ1 456 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 MAGEB2O15479 319 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 RNASEH1O60930 286 aaKnown RBP5.67□□□□□ -1.5
CPSF2-201ENST00000298875 VAV1P15498 845 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 GSTM5P46439 218 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 C5orf22Q49AR2 442 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 BICRALQ6AI39 1079 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 ERO1BQ86YB8 467 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 SP8Q8IXZ3 490 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 DGCR6LQ9BY27 220 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 VAV3Q9UKW4 847 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 NDUFAF1Q9Y375 327 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 NWD1Q149M9 1564 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 ALKQ9UM73 1620 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 RBP1P09455 135 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 CCT3P49368 545 aaKnown RBP5.67□□□□□ -1.5
CPSF2-201ENST00000298875 RPL10AP62906 217 aaKnown RBP5.67□□□□□ -1.5
CPSF2-201ENST00000298875 ZNF846Q147U1 533 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 NYAP1Q6ZVC0 841 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 ENGASEQ8NFI3 743 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 S100A13Q99584 98 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 MROH7Q68CQ1 1323 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 FOXN3O00409 490 aaPredicted RBP5.67□□□□□ -1.5
CPSF2-201ENST00000298875 SKIV2L2P42285 1042 aaKnown RBP5.67□□□□□ -1.5
CPSF2-201ENST00000298875 TNFAIP8L3Q5GJ75 292 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 IFNLR1Q8IU57 520 aaPredicted RBP5.67□□□□□ -1.5
CPSF2-201ENST00000298875 FBXO32Q969P5 355 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 APOPT1Q96IL0 206 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 ZMYM5Q9UJ78 669 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 KIDINS220Q9ULH0 1771 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 E9PCH4 1651 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 CNTNAP2Q9UHC6 1331 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 MAGEB16A2A368 324 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 PTGES3LE9PB15 166 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 WWP2O00308 870 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 MT-CO1P00395 513 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 IFNA16P05015 189 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 VEGFAP15692 232 aaPredicted RBP5.67□□□□□ -1.5
CPSF2-201ENST00000298875 ALDH7A1P49419 539 aaKnown RBP5.67□□□□□ -1.5
CPSF2-201ENST00000298875 NR6A1Q15406 480 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 MTSS1LQ765P7 747 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 LPCAT1Q8NF37 534 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 IGDCC4Q8TDY8 1250 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 STK32AQ8WU08 396 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 OSGEPL1Q9H4B0 414 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 JMJD4Q9H9V9 463 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 PPIEQ9UNP9 301 aaKnown RBP5.67□□□□□ -1.5
CPSF2-201ENST00000298875 PRMT3O60678 531 aa5.66□□□□□ -1.5
CPSF2-201ENST00000298875 WARSP23381 471 aaKnown RBP5.66□□□□□ -1.5
CPSF2-201ENST00000298875 CLK2P49760 499 aaKnown RBP5.66□□□□□ -1.5
CPSF2-201ENST00000298875 CSHL1Q14406 222 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms