RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 ATP9BO43861 1147 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 AVPR1AP37288 418 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 JAK3P52333 1124 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 PGGT1BP53609 377 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 CDH8P55286 799 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 GCNT1Q02742 428 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 RALGDSQ12967 914 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 KLF10Q13118 480 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 C15orf59Q2T9L4 293 aaPredicted RBP15.23■□□□□ 0.03
SPIDR-201ENST00000297423 CHST13Q8NET6 341 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 UBIAD1Q9Y5Z9 338 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 CLIC3O95833 236 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 MIPP30301 263 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 CDKL1Q00532 357 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 MYBPC1Q00872 1141 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 WASHC5Q12768 1159 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 NME3Q13232 169 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 MAPK11Q15759 364 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 Q3C1V9 767 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 TREML2Q5T2D2 321 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 C1QTNF12Q5T7M4 302 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 TFB1MQ8WVM0 346 aaKnown RBP15.23■□□□□ 0.03
SPIDR-201ENST00000297423 NDEL1Q9GZM8 345 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 GINS2Q9Y248 185 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 CPA3P15088 417 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 PDGFRAP16234 1089 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 MYL6P60660 151 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 STXBP2Q15833 593 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 CHST15Q7LFX5 561 aaPredicted RBP15.22■□□□□ 0.03
SPIDR-201ENST00000297423 TDRD5Q8NAT2 981 aaKnown RBP15.22■□□□□ 0.03
SPIDR-201ENST00000297423 PDCD6IPQ8WUM4 868 aaKnown RBP15.22■□□□□ 0.03
SPIDR-201ENST00000297423 ZNF516Q92618 1163 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 GCOM2Q9BZD3 368 aaPredicted RBP15.22■□□□□ 0.03
SPIDR-201ENST00000297423 MTMR12Q9C0I1 747 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 COQ10BQ9H8M1 238 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 COQ6Q9Y2Z9 468 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 FAM149AA5PLN7 773 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 CXCL11O14625 94 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 ERVK-10P10266 1014 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 MRPS5P82675 430 aaKnown RBP15.22■□□□□ 0.03
SPIDR-201ENST00000297423 PTK2BQ14289 1009 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 SH3PXD2AQ5TCZ1 1133 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 POTEHQ6S545 545 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 CATSPER1Q8NEC5 780 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 BSNDQ8WZ55 320 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 HEXIM2Q96MH2 286 aaKnown RBP15.22■□□□□ 0.03
SPIDR-201ENST00000297423 ZNF214Q9UL59 606 aaPredicted RBP15.22■□□□□ 0.03
SPIDR-201ENST00000297423 M0QYV0 167 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 USP12O75317 370 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 SFNP31947 248 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 BNIP3Q12983 259 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 SLC9B1Q4ZJI4 515 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 EGFLAMQ63HQ2 1017 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 C16orf89Q6UX73 402 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 UNC5AQ6ZN44 842 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 ZNF677Q86XU0 584 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 ZNF781Q8N8C0 355 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 SMYD1Q8NB12 490 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 NOL11Q9H8H0 719 aaKnown RBP15.22■□□□□ 0.03
SPIDR-201ENST00000297423 APOBEC3GQ9HC16 384 aaKnown RBP15.22■□□□□ 0.03
SPIDR-201ENST00000297423 KCND2Q9NZV8 630 aa15.22■□□□□ 0.03
SPIDR-201ENST00000297423 SDR42E2A6NKP2 422 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 GMNNO75496 209 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 SERPINE1P05121 402 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 GJA8P48165 433 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 NUP107P57740 925 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 DSELQ8IZU8 1212 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 PARP8Q8N3A8 854 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 TMEM161BQ8NDZ6 487 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 LRTOMTQ8WZ04 291 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 GFM2Q969S9 779 aaKnown RBP15.21■□□□□ 0.03
SPIDR-201ENST00000297423 WDR83Q9BRX9 315 aaKnown RBP15.21■□□□□ 0.03
SPIDR-201ENST00000297423 BRD8Q9H0E9 1235 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 WDR41Q9HAD4 459 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 EBF1Q9UH73 591 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 USP18Q9UMW8 372 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 TELO2Q9Y4R8 837 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 BRCA1P38398 1863 aaKnown RBP15.21■□□□□ 0.03
SPIDR-201ENST00000297423 CCDC130P13994 396 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 ME2P23368 584 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 CCR10P46092 362 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 YWHAZP63104 245 aaKnown RBP15.21■□□□□ 0.03
SPIDR-201ENST00000297423 C1QBPQ07021 282 aaKnown RBP15.21■□□□□ 0.03
SPIDR-201ENST00000297423 KCTD2Q14681 263 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 RELL1Q8IUW5 271 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 FNDC8Q8TC99 324 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 NKD2Q969F2 451 aaPredicted RBP15.21■□□□□ 0.03
SPIDR-201ENST00000297423 OR52B2Q96RD2 323 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 APOL2Q9BQE5 337 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 CAB39LQ9H9S4 337 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 FAM49BQ9NUQ9 324 aa15.21■□□□□ 0.03
SPIDR-201ENST00000297423 PSMD12O00232 456 aaPredicted RBP15.21■□□□□ 0.02
SPIDR-201ENST00000297423 SMIM18P0DKX4 95 aa15.21■□□□□ 0.02
SPIDR-201ENST00000297423 THRAP10827 490 aa15.21■□□□□ 0.02
SPIDR-201ENST00000297423 GNL1P36915 607 aaPredicted RBP15.21■□□□□ 0.02
SPIDR-201ENST00000297423 GNA12Q03113 381 aa15.21■□□□□ 0.02
SPIDR-201ENST00000297423 PITRM1Q5JRX3 1037 aa15.21■□□□□ 0.02
SPIDR-201ENST00000297423 KYAT3Q6YP21 454 aaKnown RBP15.21■□□□□ 0.02
SPIDR-201ENST00000297423 ZNF410Q86VK4 478 aa15.21■□□□□ 0.02
SPIDR-201ENST00000297423 ZNF276Q8N554 614 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms