RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 KCNH2Q12809 1159 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 UBAP2LQ14157 1087 aaKnown RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 ELOAQ14241 798 aaKnown RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 WDR44Q5JSH3 913 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 EIF3MQ7L2H7 374 aaKnown RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 SLC13A5Q86YT5 568 aaPredicted RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 RDM1Q8NG50 284 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 TRIT1Q9H3H1 467 aaKnown RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 CPNE5Q9HCH3 593 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 PNMA8BQ9ULN7 279 aaPredicted RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 LOC100506127A0A0U1RQW1 187 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 TRDMT1O14717 391 aaKnown RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 FTLP02792 175 aaPredicted RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 CYP1A1P04798 512 aaPredicted RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 DRG2P55039 364 aaKnown RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 IL5RAQ01344 420 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 CCNG2Q16589 344 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 BTBD16Q32M84 506 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 SPATS1Q496A3 300 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 DUPD1Q68J44 220 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 KSR2Q6VAB6 950 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 SSX9Q7RTT3 188 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 METTL23Q86XA0 190 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 PPM1KQ8N3J5 372 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 MAGEE2Q8TD90 523 aaPredicted RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 MAP6Q96JE9 813 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 PANX3Q96QZ0 392 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 PLEKHF1Q96S99 279 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 USE1Q9NZ43 259 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 CNOT11Q9UKZ1 510 aaKnown RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 CSADQ9Y600 493 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 CLASP1Q7Z460 1538 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 VILLO15195 856 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 OR52Z1P0C646 297 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 IL7P13232 177 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 OSBPP22059 807 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 ATXN1P54253 815 aaKnown RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 BTN1A1Q13410 526 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 FAM205BPQ63HN1 556 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 RAP1GAP2Q684P5 730 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 ZNF517Q6ZMY9 492 aaPredicted RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 ZC3H7AQ8IWR0 971 aaKnown RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 C8orf59Q8N0T1 100 aaPredicted RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 PROM2Q8N271 834 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 PARP8Q8N3A8 854 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 CAMKK1Q8N5S9 505 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 ZNF564Q8TBZ8 553 aaPredicted RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 DPF3Q92784 378 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 C19orf60Q96EN9 201 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 SLC39A13Q96H72 371 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 KIFC1Q9BW19 673 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 ERVMER34-1Q9H9K5 563 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 ANAPC7Q9UJX3 599 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 SNX8Q9Y5X2 465 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 MEN1O00255 615 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 HOXA2O43364 376 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 OR2B3O76000 313 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 NOL4O94818 638 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 PTPN2P17706 415 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 ITGA6P23229 1130 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 CAPGP40121 348 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 YAP1P46937 504 aaKnown RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 TLR1Q15399 786 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 KCTD19Q17RG1 926 aaPredicted RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 LARP4BQ92615 738 aaKnown RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 C17orf62Q9BQA9 187 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 TMEM109Q9BVC6 243 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 COPZ2Q9P299 210 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 TIMM22Q9Y584 194 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 ZMPSTE24O75844 475 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 SERPINA6P08185 405 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 NR3C2P08235 984 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 FDPSP14324 419 aaKnown RBP11.97□□□□□ -0.49
SNIP1-201ENST00000296215 CREB1P16220 341 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 TATP17735 454 aaPredicted RBP11.97□□□□□ -0.49
SNIP1-201ENST00000296215 RPP38P78345 283 aaKnown RBP11.97□□□□□ -0.49
SNIP1-201ENST00000296215 SH3RF1Q7Z6J0 888 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 DHFR2Q86XF0 187 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 SPAG16Q8N0X2 631 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 CLYBLQ8N0X4 340 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 ANGPTL6Q8NI99 470 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 C10orf82Q8WW14 230 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 SLC7A6OSQ96CW6 309 aaPredicted RBP11.97□□□□□ -0.49
SNIP1-201ENST00000296215 TMCO6Q96DC7 493 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 UFSP2Q9NUQ7 469 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.97□□□□□ -0.49
SNIP1-201ENST00000296215 NAGPAQ9UK23 515 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 TPRKBQ9Y3C4 175 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 CPQQ9Y646 472 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 LMTK3Q96Q04 1460 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 PCF11O94913 1555 aaKnown RBP11.97□□□□□ -0.49
SNIP1-201ENST00000296215 DDX6P26196 483 aaKnown RBP eCLIP11.97□□□□□ -0.49
SNIP1-201ENST00000296215 HNF4AP41235 474 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 BTDP43251 543 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 ADGRE1Q14246 886 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 ZC3H12BQ5HYM0 836 aaKnown RBP11.97□□□□□ -0.49
SNIP1-201ENST00000296215 ZNF57Q68EA5 555 aaPredicted RBP11.97□□□□□ -0.49
SNIP1-201ENST00000296215 IGFN1Q86VF2 1251 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 TRIM69Q86WT6 500 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms