RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 NADK2Q4G0N4 442 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 CELF3Q5SZQ8 465 aaKnown RBP10.65□□□□□ -0.7
SKA1-201ENST00000285116 ZNF554Q86TJ5 538 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 PSTKQ8IV42 348 aaKnown RBP10.65□□□□□ -0.7
SKA1-201ENST00000285116 ACTRT2Q8TDY3 377 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 SNRNP25Q9BV90 132 aaKnown RBP10.65□□□□□ -0.7
SKA1-201ENST00000285116 EMCNQ9ULC0 261 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 DTNAQ9Y4J8 743 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 FNDC1Q4ZHG4 1894 aaPredicted RBP10.65□□□□□ -0.7
SKA1-201ENST00000285116 ITGB3P05106 788 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 SERPINE1P05121 402 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 APRTP07741 180 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 KITP10721 976 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 RAG1P15918 1043 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 ACAT1P24752 427 aaKnown RBP10.65□□□□□ -0.7
SKA1-201ENST00000285116 SERPINB8P50452 374 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 COPAP53621 1224 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 SNAPC2Q13487 334 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 AMHR2Q16671 573 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 GRAMD1BQ3KR37 738 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 OGFRL1Q5TC84 451 aaPredicted RBP10.65□□□□□ -0.7
SKA1-201ENST00000285116 SH3PXD2AQ5TCZ1 1133 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 JADE1Q6IE81 842 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 CCDC33Q8N5R6 958 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 LINC01465Q8N7H1 131 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 GAB3Q8WWW8 586 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 KLRG1Q96E93 195 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 ZNF778Q96MU6 729 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 MPHOSPH6Q99547 160 aaKnown RBP10.65□□□□□ -0.7
SKA1-201ENST00000285116 C20orf27Q9GZN8 174 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 DDX18Q9NVP1 670 aaKnown RBP10.65□□□□□ -0.7
SKA1-201ENST00000285116 THEGQ9P2T0 379 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 MARCOQ9UEW3 520 aaPredicted RBP10.65□□□□□ -0.7
SKA1-201ENST00000285116 ADAM28Q9UKQ2 775 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 LZTS1Q9Y250 596 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 OTOFQ9HC10 1997 aa10.65□□□□□ -0.71
SKA1-201ENST00000285116 FZD9O00144 591 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 GPR25O00155 361 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 HBP1O60381 514 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 PLIN3O60664 434 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 DGKIO75912 1065 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 STAG3L1P0CL83 205 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 NUMBP49757 651 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 EPHB1P54762 984 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 C15orf59Q2T9L4 293 aaPredicted RBP10.64□□□□□ -0.71
SKA1-201ENST00000285116 LRRC8BQ6P9F7 803 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 BORAQ6PGQ7 559 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 RNF168Q8IYW5 571 aaPredicted RBP10.64□□□□□ -0.71
SKA1-201ENST00000285116 SHKBP1Q8TBC3 707 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 DDI1Q8WTU0 396 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 HPDLQ96IR7 371 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 HEXIM2Q96MH2 286 aaKnown RBP10.64□□□□□ -0.71
SKA1-201ENST00000285116 NT5C1AQ9BXI3 368 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 BTBD7Q9P203 1132 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 DERAQ9Y315 318 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 ZNF195O14628 629 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 UGT1A9O60656 530 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 METTL18O95568 372 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 HNRNPCP07910 306 aaKnown RBP eCLIP10.64□□□□□ -0.71
SKA1-201ENST00000285116 KRT19P08727 400 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 SDC4P31431 198 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 PHKA2P46019 1235 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 EMP3P54852 163 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 RBP5P82980 135 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 TLR1Q15399 786 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 FASTKD1Q53R41 847 aaKnown RBP10.64□□□□□ -0.71
SKA1-201ENST00000285116 OR6B2Q6IFH4 312 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 EEPD1Q7L9B9 569 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 TMEM126BQ8IUX1 230 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 AHI1Q8N157 1196 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 TAB3Q8N5C8 712 aaPredicted RBP10.64□□□□□ -0.71
SKA1-201ENST00000285116 METTL25Q8N6Q8 603 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 ZFP28Q8NHY6 868 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 DEPDC1BQ8WUY9 529 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 ABTB1Q969K4 478 aaPredicted RBP10.64□□□□□ -0.71
SKA1-201ENST00000285116 GCNAQ96QF7 691 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 ZNF696Q9H7X3 374 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 UGT1A7Q9HAW7 530 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 UGT1A10Q9HAW8 530 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 UGT1A8Q9HAW9 530 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 CDH22Q9UJ99 828 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 TSPAN16Q9UKR8 245 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 RAB26Q9ULW5 256 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 POMPQ9Y244 141 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 USP3Q9Y6I4 520 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 LTBP3Q9NS15 1303 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.64□□□□□ -0.71
SKA1-201ENST00000285116 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.64□□□□□ -0.71
SKA1-201ENST00000285116 SOCS7O14512 581 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 CYB561D2O14569 222 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 B4GALT5O43286 388 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 TNFAIP8O95379 198 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 CYP2C8P10632 490 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 CPA3P15088 417 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 CYP2F1P24903 491 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 PMLP29590 882 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 ALDH1A3P47895 512 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 HK2P52789 917 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 NDST1P52848 882 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 HDAC4P56524 1084 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms