RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 TIPRLO75663 272 aa14.56□□□□□ -0.08
VPS26B-201ENST00000281187 ZFXP17010 805 aaPredicted RBP14.56□□□□□ -0.08
VPS26B-201ENST00000281187 GP5P40197 560 aa14.56□□□□□ -0.08
VPS26B-201ENST00000281187 PGGT1BP53609 377 aa14.56□□□□□ -0.08
VPS26B-201ENST00000281187 GOLGA7BQ2TAP0 167 aa14.56□□□□□ -0.08
VPS26B-201ENST00000281187 ACOT1Q86TX2 421 aa14.56□□□□□ -0.08
VPS26B-201ENST00000281187 TMIGD2Q96BF3 282 aa14.56□□□□□ -0.08
VPS26B-201ENST00000281187 SNRNP25Q9BV90 132 aaKnown RBP14.56□□□□□ -0.08
VPS26B-201ENST00000281187 IDI2Q9BXS1 227 aa14.56□□□□□ -0.08
VPS26B-201ENST00000281187 VPS33BQ9H267 617 aa14.56□□□□□ -0.08
VPS26B-201ENST00000281187 NMRAL1Q9HBL8 299 aa14.56□□□□□ -0.08
VPS26B-201ENST00000281187 DDX43Q9NXZ2 648 aaKnown RBP14.56□□□□□ -0.08
VPS26B-201ENST00000281187 AKT3Q9Y243 479 aa14.56□□□□□ -0.08
VPS26B-201ENST00000281187 GLI3P10071 1580 aa14.56□□□□□ -0.08
VPS26B-201ENST00000281187 FAM149AA5PLN7 773 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 DHRS4L1P0CG22 281 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 CHRNA5P30532 468 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 SNX16P57768 344 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 SURF1Q15526 300 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 SLC9A4Q6AI14 798 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 ADGRF2Q8IZF7 708 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 LRTOMTQ8WZ04 291 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 WDR83Q9BRX9 315 aaKnown RBP14.55□□□□□ -0.08
VPS26B-201ENST00000281187 COQ10BQ9H8M1 238 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 SNX15Q9NRS6 342 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 ATP6AP2A0A1C7CYW4 349 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 OGTO15294 1046 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 ATP6AP2O75787 350 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 TFAP2AP05549 437 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 ADORA2AP29274 412 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 ADGRE1Q14246 886 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 SCARA3Q6AZY7 606 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 C12orf29Q8N999 325 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 ST6GALNAC4Q9H4F1 302 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 STK39Q9UEW8 545 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 C10orf71Q711Q0 1435 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 BUD23O43709 281 aaKnown RBP14.55□□□□□ -0.08
VPS26B-201ENST00000281187 CCNT2O60583 730 aaKnown RBP14.55□□□□□ -0.08
VPS26B-201ENST00000281187 GMNNO75496 209 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 ABCD1P33897 745 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 GRIA3P42263 894 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 CCR10P46092 362 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 STAT5BP51692 787 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 SFSWAPQ12872 951 aaKnown RBP14.55□□□□□ -0.08
VPS26B-201ENST00000281187 KLHL35Q6PF15 583 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 HAPLN3Q96S86 360 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 PLGRKTQ9HBL7 147 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 PTPRHQ9HD43 1115 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 CHST12Q9NRB3 414 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 TSPAN16Q9UKR8 245 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 PSAT1Q9Y617 370 aa14.55□□□□□ -0.08
VPS26B-201ENST00000281187 OATP04181 439 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 CDK4P11802 303 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 TSHRP16473 764 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 PCSK6P29122 969 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 NAMPTP43490 491 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 CSE1LP55060 971 aaKnown RBP14.54□□□□□ -0.08
VPS26B-201ENST00000281187 PITRM1Q5JRX3 1037 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 LDLRAP1Q5SW96 308 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 GK5Q6ZS86 529 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 WDR49Q8IV35 697 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 EXOC8Q8IYI6 725 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 SIX6OS1Q8N1H7 587 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 CDH19Q9H159 772 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 C1orf21Q9H246 121 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 POLR1BQ9H9Y6 1135 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 TRNAU1APQ9NX07 287 aaKnown RBP14.54□□□□□ -0.08
VPS26B-201ENST00000281187 ZNF70Q9UC06 446 aaPredicted RBP14.54□□□□□ -0.08
VPS26B-201ENST00000281187 AP4E1Q9UPM8 1137 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 TELO2Q9Y4R8 837 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 PCDHA11Q9Y5I1 949 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 PMM2O15305 246 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 VAPBO95292 243 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 IL10P22301 178 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 CNTFP26441 200 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 PSMB4P28070 264 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 HMOX2P30519 316 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 AP3M2P53677 418 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 MTTPP55157 894 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 MPP3Q13368 585 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 STILQ15468 1287 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 PERM1Q5SV97 790 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 OTUD3Q5T2D3 398 aaPredicted RBP14.54□□□□□ -0.08
VPS26B-201ENST00000281187 XKR5Q6UX68 686 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 OR52K1Q8NGK4 314 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 TMEM176AQ96HP8 235 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 PRICKLE1Q96MT3 831 aaPredicted RBP14.54□□□□□ -0.08
VPS26B-201ENST00000281187 RTKNQ9BST9 563 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 SNX25Q9H3E2 840 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 UBAP1Q9NZ09 502 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 GGA3Q9NZ52 723 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 RAB26Q9ULW5 256 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 SF3B1O75533 1304 aaKnown RBP eCLIP14.54□□□□□ -0.082e-7■■■■■ 83.2
VPS26B-201ENST00000281187 PENKP01210 267 aaPredicted RBP14.54□□□□□ -0.08
VPS26B-201ENST00000281187 MYL4P12829 197 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 TSPAN8P19075 237 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 NR4A1P22736 598 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 PTGER2P43116 358 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 GRIA4P48058 902 aa14.54□□□□□ -0.08
VPS26B-201ENST00000281187 SLC25A11Q02978 314 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms