RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 ZNF541Q9H0D2 1346 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 GNAO1P09471 354 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 SIGIRRQ6IA17 410 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 ZNF720Q7Z2F6 126 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 FAM178BQ8IXR5 827 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 ELMOD1Q8N336 334 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 OTUD5Q96G74 571 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 SLC29A1Q99808 456 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 TP63Q9H3D4 680 aaPredicted RBP16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 PALMDQ9NP74 551 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 BCAP29Q9UHQ4 241 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 DNAJC16Q9Y2G8 782 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 PLLPQ9Y342 182 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 PCDHB2Q9Y5E7 798 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 NOP56O00567 594 aaKnown RBP16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 KCNH1O95259 989 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 GZMAP12544 262 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 GAP43P17677 238 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 NCF2P19878 526 aaPredicted RBP16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 CLK3P49761 638 aaKnown RBP16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 TUBA4AP68366 448 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 STX3Q13277 289 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 TNFAIP1Q13829 316 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 KLHL38Q2WGJ6 581 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 BBS9Q3SYG4 887 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 DLK2Q6UY11 383 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 TRUB1Q8WWH5 349 aaKnown RBP16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 LPAR1Q92633 364 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 OLFM1Q99784 485 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 FRMD8Q9BZ67 464 aaPredicted RBP16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 AGO4Q9HCK5 861 aaKnown RBP16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 ZHX2Q9Y6X8 837 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 PRSS51A0A1B0GVH4 220 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 ARHGEF35A5YM69 484 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 TRIM49D1C9J1S8 452 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 DCXO43602 365 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 JRKO75564 520 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 C8BP07358 591 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 TCF4P15884 667 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 HSPA13P48723 471 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 MTMR1Q13613 665 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 ATG16L1Q676U5 607 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 CATSPER1Q8NEC5 780 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 ZSCAN18Q8TBC5 510 aaPredicted RBP16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 USP13Q92995 863 aaPredicted RBP16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 PNPLA3Q9NST1 481 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 STK39Q9UEW8 545 aa16.11■□□□□ 0.17
CTDSP1-201ENST00000273062 KAT6AQ92794 2004 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 FARP2O94887 1054 aaPredicted RBP16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 ETFBP38117 255 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 GPC3P51654 580 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 AP3M2P53677 418 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 ESRRGP62508 458 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 BMPR2Q13873 1038 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 PGM5Q15124 567 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 PADI6Q6TGC4 694 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 KCNT2Q6UVM3 1135 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 ATP6V0D2Q8N8Y2 350 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 EXD1Q8NHP7 514 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 TRPC4APQ8TEL6 797 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 KCNK16Q96T55 309 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 RIT2Q99578 217 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 PSD2Q9BQI7 771 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 NPLQ9BXD5 320 aaPredicted RBP16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 MROQ9BYG7 248 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 UBIAD1Q9Y5Z9 338 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 BRCA1P38398 1863 aaKnown RBP16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 TESPA1A2RU30 521 aaPredicted RBP16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 ZBTB14O43829 449 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 GMNNO75496 209 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 KCNA2P16389 499 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 IFITM3Q01628 133 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 RAB39AQ14964 217 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 INAVAQ3KP66 663 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 PPM1LQ5SGD2 360 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 ANGEL2Q5VTE6 544 aaKnown RBP16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 PDPK2PQ6A1A2 396 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 PALM2Q8IXS6 379 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 FAM156AQ8NDB6 213 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 KREMEN1Q96MU8 473 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 GPRC5CQ9NQ84 441 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 TBC1D14Q9P2M4 693 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 FETUBQ9UGM5 382 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 APOBEC2Q9Y235 224 aaKnown RBP16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 USTQ9Y2C2 406 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 TRAF6Q9Y4K3 522 aa16.1■□□□□ 0.17
CTDSP1-201ENST00000273062 IQANK1A0A1B0GTG1 560 aa16.09■□□□□ 0.17
CTDSP1-201ENST00000273062 TCRBV9S1A1TA0A576 114 aa16.09■□□□□ 0.17
CTDSP1-201ENST00000273062 STX16-NPEPL1H3BU86 382 aa16.09■□□□□ 0.17
CTDSP1-201ENST00000273062 VWA5AO00534 786 aa16.09■□□□□ 0.17
CTDSP1-201ENST00000273062 KPNA4O00629 521 aaPredicted RBP16.09■□□□□ 0.17
CTDSP1-201ENST00000273062 AIM2O14862 343 aa16.09■□□□□ 0.17
CTDSP1-201ENST00000273062 ATF7P17544 494 aaPredicted RBP16.09■□□□□ 0.17
CTDSP1-201ENST00000273062 CXCR2P25025 360 aa16.09■□□□□ 0.17
CTDSP1-201ENST00000273062 GCLMP48507 274 aa16.09■□□□□ 0.17
CTDSP1-201ENST00000273062 HNRNPFP52597 415 aaKnown RBP16.09■□□□□ 0.17
CTDSP1-201ENST00000273062 PPP3CAQ08209 521 aa16.09■□□□□ 0.17
CTDSP1-201ENST00000273062 PRKG1Q13976 671 aa16.09■□□□□ 0.17
CTDSP1-201ENST00000273062 IKBKEQ14164 716 aa16.09■□□□□ 0.17
CTDSP1-201ENST00000273062 TTC39CQ8N584 583 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms